Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00026 ATGGAAGCAGGGGAAGATTGTTGTGTCAAGGTTGCTGTCCATGTCCGACCGCTCATCAGTGATGAAAAGCTTCAGGGATGTAAAGATTGTGTCACCGTCGTCCCTGGGAAGCCTCAGGTGCAAATTGGTGCTCATTCCTTTACATTTGATCATGTTTACGGGAGTACGGGTTCTCCTTCATCCGATATGTTTGAAGAATGTGTTGCTCCCCTTGTTGATGTTTTATTCCAAGGATATAATGCCACTGTTCTCGCGTATGGTCAGACAGGTTCAGGGAAAACATACACCATGGGCACTGGTTTTAAAGATGGTTGCCAAACAGGCATAATACCCCAAGTCATGAATGTTTTGTTCAGCAAAATTGAGACTTTAAAGGATCAGATTGAATTTCAGCTACATGTTTCCTTCATTGAGATTCTTAAAGAAGAAGTACGAGACTTGTTGGATCCTTCTTCCATGAGCAAACAAGAAGCTGCTAATGGACATGGGGGAAAAGTGACAGTCCCTGGGAAACCTCCCATACAAATTCGTGAGACATCAAATGGTGTTATTACGCTGGCTGGATCTACTGAAGTAAGTGTTTCAACATTGAAAGAAATGGCTGCTTGCCTGGAACAAGGATCATTGAGCAGAGCCACTGGGAGCACAAATATGAACAACCAATCCAGTCGTTCGCATGCCATCTTCACCATCACATTAGAGCAAATGCGTAAACTCAATGGCGTCAATCCTCGCGAGAACAGTTTAAATGGGTCCATGAATGACGAGTATCTATGTGCTAAGTTGCACCTTGTGGATCTTGCTGGCTCAGAACGAGCTAAAAGAACAGGCTCTGATGGTTTGCGTTTTAAGGAAGGAATTCATATTAACAAGGGCCTCCTGGCCCTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCTTACAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTCGGTGGTAACAGCAGAACTGTTATGATAGCTTGCATAAGTCCTGCTGATATTAATGCGGAGGAAACCCTCAACACTTTGAAGTATGCAAATCGTGCCCGTAATATTCAAAATAAACCTGTTATCAACAGAGATCCCATGTCCAGTGAGATGCTGAAAATGAGACAACAACTAGAGTATTTGCAAGCTGAACTTTGTGCTCGTTCTGGGGGCTCTCCTGAGGAAGTTCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAGGATCTTTGCCGGGAACTTCACGAATACCGCAGTAGATGTTCTGTTGTAGAACAATGTGAAAAGGATGCTCATGATGGTAGCACATGCATTGTCAAGACTGAAGGGCTAAAGAGGAGCTTTCCTATAGTAGCATCTGATTATTCAATGAATGAAACAACAGGTGATTCAAGAGAAATCGAAGAAGTGGCAAAAGAATGGGAGCACACACTGCTGCAAAATAGTATGGATAGAGAGTTACATGAGTTGAATAAACGCTTGGAGCAGAAAGAGACTGAAATGAAGCTTTTTGGAGTGTCGGATGCCGAAACACTCAAGCAGCACTTTGGAAGGAAAATAATGGAGTTGGAGGATGAAAAGAGAACTGTCCAGCGAGAGAGGGATCATCTTTTAGCTGAGGTTGAAAATCTTTCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATGTCCATGCACAAAAATTGAAATCACTTGAAGCACAGATTCTGGATTTGAAGAAGAAACAAGAGAGCCAAGTCCAACTTCTGAAGCAGAAGCAAAAAAGTGATGAAGCGGCGAAGAGACTGCAAGATGAAATACAATCTATAAAAGCACAGAAGGTTCAGTTGCAACAAAGGATTAAGCAAGAGGCAGAACAATTCAGGCAGTGGAAGGCTTCTAGAGAGAAAGAGCTCCTGCAATTGCGAAAGGAAGGAAGGAAAAATGAGTATGAAAGACATAAGCTACAAGCTTTAAATCAGCGCCAAAAAATGGTCCTTCAAAGAAAGACTGAAGAAGCTGCCATGGCCACCAAAAGGCTAAAGGAGTTGTTAGAAGCTCGTAAATCTTCCTGCCGGGATACTTCAGCTATTATCAGTGGAAGTGCAACAAATGGACAGAGCAATGAGAAGTCCTTACAACGGTGGCTTGATCATGAGCTAGAAGTCATGGTGAAAGAGCATGAAGTCCGTTTTGAGTATGAGAAGCAGAGCCAAGTGAGAGCTGCTCTTGCTGAAGAGTTAGCCATACTGAAGCAAGTGAATGAATTTGCTGCAAAAGGCCTCACTCCTCCAAGAGGAAAAAATGGTTTTGCTAGAGCATCCTCCATGTCACCAAATGCTAGAATGGCCAGAATAGCTTCGCTTGAGAGCATGCTGAGCATATCATCTAATTCACTAGTGGCAATGGCTTCTCAACTTTCAGAGGCAGAAGAAAGAGAAAGAGCCTTCACTAATCGTGGACGCTGGAACCAATTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGGAGATGCTAGATGCCAACTGTGGGAGAGAGACATGGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTAGGCCTATTACGGCAGAGTGAGATGAAGCGAAAGGAAGTTGAGAAAGAGCTGAAATTGAGAGATCAAGCTTTGGCGACCACATTGGCTACGCCAGCTTCAGGAAACTCGCCAAATTCATTGAAACACTACGTTGAAGATATGAATGGATCATTATCTCCAGCGTCTGTGCCAGTACCGAAACAGCTCAAGTATACCCCAGGAGTTGTTAATGGCATAGCAGGGGAATCTGCTGCATTTATAGATCAGAGTAGAAAGTTGGTACCCATGAGGCAGCTATCAATGAAAAAACTAGCCATTGTAGGACAAGCTTCGGGGAAGTTATGGAGGTGGAAAAGAAGTCATCACCAATGGTTGGTGCAATTCAAATGGAAGTGGCAAAAGCCGTGGAGGCTTTCAGAATGGATTCGCCACAGTGACGAGACTATTATGAGAGCAAGGCCGCGGCCACAGGCTTTGCCACGTACACTATGA 3093 0.4349 MEAGEDCCVKVAVHVRPLISDEKLQGCKDCVTVVPGKPQVQIGAHSFTFDHVYGSTGSPSSDMFEECVAPLVDVLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLFSKIETLKDQIEFQLHVSFIEILKEEVRDLLDPSSMSKQEAANGHGGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNGVNPRENSLNGSMNDEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSSEMLKMRQQLEYLQAELCARSGGSPEEVQVLKERIAWLEAANEDLCRELHEYRSRCSVVEQCEKDAHDGSTCIVKTEGLKRSFPIVASDYSMNETTGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKETEMKLFGVSDAETLKQHFGRKIMELEDEKRTVQRERDHLLAEVENLSANSDGQTQKLEDVHAQKLKSLEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRKNEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSCRDTSAIISGSATNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAILKQVNEFAAKGLTPPRGKNGFARASSMSPNARMARIASLESMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVGDARCQLWERDMEIREMKDQIKELVGLLRQSEMKRKEVEKELKLRDQALATTLATPASGNSPNSLKHYVEDMNGSLSPASVPVPKQLKYTPGVVNGIAGESAAFIDQSRKLVPMRQLSMKKLAIVGQASGKLWRWKRSHHQWLVQFKWKWQKPWRLSEWIRHSDETIMRARPRPQALPRTL 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00026 1030 Coils Coil 568 640 - -
Pral3970g00026 1030 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pral3970g00026 1030 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00026 1030 Coils Coil 673 693 - -
Pral3970g00026 1030 Coils Coil 863 890 - -
Pral3970g00026 1030 CDD KISc_KIF4 7 366 - -
Pral3970g00026 1030 MobiDBLite consensus disorder prediction 154 174 - -
Pral3970g00026 1030 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Pral3970g00026 1030 Coils Coil 525 559 - -
Pral3970g00026 1030 Coils Coil 405 425 - -
Pral3970g00026 1030 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1021 IPR027640 GO:0003777|GO:0007018
Pral3970g00026 1030 Coils Coil 492 512 - -
Pral3970g00026 1030 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00026 1030 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00026 1030 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00026 1030 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00026 1030 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00026 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 396 IPR027417 -
Pral3970g00026 1030 Gene3D Kinesin motor domain 2 393 IPR036961 -
Pral3970g00026 1030 Pfam Kinesin motor domain 16 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00026 Pral-Chr3970 203414 215489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00026 9 389 Calmodulin-binding Proteins AT5G65930 33.766 3.67e-53 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00026 - - gmx:100802585 1782.69