Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00024 ATGGAAGCAGGGGAAGATTGTTGTGTCAAGGTTGCTGTCCATGTCCGACCGCTCATCAGTGATGAAAAGCTTCAGGGATGTAAAGATTGTGTCACCGTCGTCCCTGGGAAGCCTCAGGTGCAAATTGGTGCTCATTCCTTTACATTTGATCATGTTTACGGGAGTACGGGTTCTCCTTCATCCGATATGTTTGAAGAATGTGTTGCTCCCCTTGTTGATGTTTTATTCCAAGGATATAATGCCACTGTTCTCGCGTATGGTCAGACAGGTTCAGGGAAAACATACACCATGGGCACTGGTTTTAAAGATGGTTGCCAAACAGGCATAATACCCCAAGTCATGAATGTTTTGTTCAGCAAAATTGAGACTTTAAAGGATCAGATTGAATTTCAGCTACATGTTTCCTTCATTGAGATTCTTAAAGAAGAAGTACGAGACTTGTTGGATCCTTCTTCCATGAGCAAACAAGAAGCTGCTAATGGACATGGGGGAAAAGTGACAGTCCCTGGGAAACCTCCCATACAAATTCGTGAGACATCAAATGGTGTTATTACGCTGGCTGGATCTACTGAAGTAAGTGTTTCAACATTGAAAGAAATGGCTGCTTGCCTGGAACAAGGATCATTGAGCAGAGCCACTGGGAGCACAAATATGAACAACCAATCCAGTCGTTCGCATGCCATCTTCACCATCACATTAGAGCAAATGCGTAAACTCAATGGCGTCAATCCTCGCGAGAACAGTTTAAATGGGTCCATGAATGACGAGTATCTATGTGCTAAGTTGCACCTTGTGGATCTTGCTGGCTCAGAACGAGCTAAAAGAACAGGCTCTGATGGTTTGCGTTTTAAGGAAGGAATTCATATTAACAAGGGCCTCCTGGCCCTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCTTACAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTCGGTGGTAACAGCAGAACTGTTATGATAGCTTGCATAAGTCCTGCTGATATTAATGCGGAGGAAACCCTCAACACTTTGAAGTATGCAAATCGTGCCCGTAATATTCAAAATAAACCTGTTATCAACAGAGATCCCATGTCCAGTGAGATGCTGAAAATGAGACAACAACTAGAGTATTTGCAAGCTGAACTTTGTGCTCGTTCTGGGGGCTCTCCTGAGGAAGTTCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAGGATCTTTGCCGGGAACTTCACGAATACCGCAGTAGATGTTCTGTTGTAGAACAATGTGAAAAGGATGCTCATGATGGTAGCACATGCATTGTCAAGACTGAAGGGCTAAAGAGGAGCTTTCCTATAGTAGCATCTGATTATTCAATGAATGAAACAACAGCAGGTGATTCAAGAGAAATCGAAGAAGTGGCAAAAGAATGGGAGCACACACTGCTGCAAAATAGTATGGATAGAGAGTTACATGAGTTGAATAAACGCTTGGAGCAGAAAGAGACTGAAATGAAGCTTTTTGGAGTGTCGGATGCCGAAACACTCAAGCAGCACTTTGGAAGGAAAATAATGGAGTTGGAGGATGAAAAGAGAACTGTCCAGCGAGAGAGGGATCATCTTTTAGCTGAGGTTGAAAATCTTTCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATGTCCATGCACAAAAATTGAAATCACTTGAAGCACAGATTCTGGATTTGAAGAAGAAACAAGAGAGCCAAGTCCAACTTCTGAAGCAGAAGCAAAAAAGTGATGAAGCGGCGAAGAGACTGCAAGATGAAATACAATCTATAAAAGCACAGAAGGTTCAGTTGCAACAAAGGATTAAGCAAGAGGCAGAACAATTCAGGCAGTGGAAGGCTTCTAGAGAGAAAGAGCTCCTGCAATTGCGAAAGGAAGGAAGGAAAAATGAGTATGAAAGACATAAGCTACAAGCTTTAAATCAGCGCCAAAAAATGGTCCTTCAAAGAAAGACTGAAGAAGCTGCCATGGCCACCAAAAGGCTAAAGGAGTTGTTAGAAGCTCGTAAATCTTCCTGCCGGGATACTTCAGCTATTATCAGTGGAAGTGCAACAAATGGACAGAGCAATGAGAAGTCCTTACAACGGTGGCTTGATCATGAGCTAGAAGTCATGGTGAAAGAGCATGAAGTCCGTTTTGAGTATGAGAAGCAGAGCCAAGTGAGAGCTGCTCTTGCTGAAGAGTTAGCCATACTGAAGCAAGTGAATGAATTTGCTGCAAAAGGCCTCACTCCTCCAAGAGGAAAAAATGGTTTTGCTAGAGCATCCTCCATGTCACCAAATGCTAGAATGGCCAGAATAGCTTCGCTTGAGAGCATGCTGAGCATATCATCTAATTCACTAGTGGCAATGGCTTCTCAACTTTCAGAGGCAGAAGAAAGAGAAAGAGCCTTCACTAATCGTGGACGCTGGAACCAATTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGGAGATGCTAGATGCCAACTGTGGGAGAGAGACATGGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTAGGCCTATTACGGCAGAGTGAGATGAAGCGAAAGGAAGTTGAGAAAGAGCTGAAATTGAGAGATCAAGCTTTGGCGACCACATTGGCTACGCCAGCTTCAGGAAACTCGCCAAATTCATTGAAACACTACGTTGAAGATATGAATGGATCATTATCTCCAGCGTCTGTGCCAGTACCGAAACAGCTCAAGTATACCCCAGGAGTTGTTAATGGCATAGCAGGGGAATCTGCTGCATTTATAGATCAGAGTAGAAAGTTGGTACCCATGAGGCAGCTATCAATGAAAAAACTAGCCATTGTAGGACAAGCTTCGGGGAAGTTATGGAGGTGGAAAAGAAGTCATCACCAATGGTTGGTGCAATTCAAATGGAAGTGGCAAAAGCCGTGGAGGCTTTCAGAATGGATTCGCCACAGTGACGAGACTATTATGAGAGCAAGGCCGCGGCCACAGGCTTTGCCACGTACACTATGA 3096 0.4351 MEAGEDCCVKVAVHVRPLISDEKLQGCKDCVTVVPGKPQVQIGAHSFTFDHVYGSTGSPSSDMFEECVAPLVDVLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLFSKIETLKDQIEFQLHVSFIEILKEEVRDLLDPSSMSKQEAANGHGGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNGVNPRENSLNGSMNDEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSSEMLKMRQQLEYLQAELCARSGGSPEEVQVLKERIAWLEAANEDLCRELHEYRSRCSVVEQCEKDAHDGSTCIVKTEGLKRSFPIVASDYSMNETTAGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKETEMKLFGVSDAETLKQHFGRKIMELEDEKRTVQRERDHLLAEVENLSANSDGQTQKLEDVHAQKLKSLEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRKNEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSCRDTSAIISGSATNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAILKQVNEFAAKGLTPPRGKNGFARASSMSPNARMARIASLESMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVGDARCQLWERDMEIREMKDQIKELVGLLRQSEMKRKEVEKELKLRDQALATTLATPASGNSPNSLKHYVEDMNGSLSPASVPVPKQLKYTPGVVNGIAGESAAFIDQSRKLVPMRQLSMKKLAIVGQASGKLWRWKRSHHQWLVQFKWKWQKPWRLSEWIRHSDETIMRARPRPQALPRTL 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00024 1031 Coils Coil 864 891 - -
Pral3970g00024 1031 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pral3970g00024 1031 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00024 1031 Coils Coil 569 641 - -
Pral3970g00024 1031 CDD KISc_KIF4 7 366 - -
Pral3970g00024 1031 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1022 IPR027640 GO:0003777|GO:0007018
Pral3970g00024 1031 Coils Coil 493 513 - -
Pral3970g00024 1031 Coils Coil 674 694 - -
Pral3970g00024 1031 MobiDBLite consensus disorder prediction 154 174 - -
Pral3970g00024 1031 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Pral3970g00024 1031 Coils Coil 405 425 - -
Pral3970g00024 1031 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00024 1031 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00024 1031 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00024 1031 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00024 1031 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00024 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 396 IPR027417 -
Pral3970g00024 1031 Coils Coil 526 560 - -
Pral3970g00024 1031 Gene3D Kinesin motor domain 2 393 IPR036961 -
Pral3970g00024 1031 Pfam Kinesin motor domain 16 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00024 Pral-Chr3970 203411 215489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00024 9 389 Calmodulin-binding Proteins AT5G65930 33.766 3.47e-53 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00024 - - gmx:100786770 1783.46