Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00018 ATGGGAAGCATGAAGGTGCATCAGTTGGCACGTGCGCTGTGGGAGCACGAACCCTCACCCTCCCTCTCTCTCGGCTGCAAACGCCTCCGCCCTCTCGCCCCCAAGCTCCCTTCCTCCCCCACCTCTCCCACCACTCCCTTCGATCTCAAGACCTTCATCCGCCCAGAAAGTGGCCCCAGAAAACTCTCCGACGATCCTCACAGAGATTCCCCCCAGCAGGTGGAAACGCATCCGGGAGGGACGAGATGGAACCCCACGCAGGAACAGATAGGGATACTGGAGATGCTGTACCGAGGGGGCATGAGAACCCCCAATGCTCAGCAGATAGAGCAGATCACGGCTCAGCTCGCCAAGTATGGCAAGATCGAAGGCAAGAATGTCTTCTACTGGTTCCAGAACCACAAAGCACGCGAGAGGCAAAAGCAGAAACGCAACAATCTTGCCCTCTCTCCAACTCCCAGATCCACTGTTTCCAACCCCATTACTACTACCACCACGACTACCGTGACTTTTGACGCAAGGCTGGGTGAAGTAGTGGGGACGGAGGAGGATAGTCCGTACAAGAAGAAGTGCATGAGCTGGGCGTTTGAGGGGTTCCAAGAACAAAGCAGGCCGTGTAAAGAGGAGGAACACACAACTCTGGAGCTTTTCCCGTTACACCCGGAAGGCAGATGA 675 0.5615 MGSMKVHQLARALWEHEPSPSLSLGCKRLRPLAPKLPSSPTSPTTPFDLKTFIRPESGPRKLSDDPHRDSPQQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLAKYGKIEGKNVFYWFQNHKARERQKQKRNNLALSPTPRSTVSNPITTTTTTTVTFDARLGEVVGTEEDSPYKKKCMSWAFEGFQEQSRPCKEEEHTTLELFPLHPEGR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00018 224 MobiDBLite consensus disorder prediction 32 87 - -
Pral3970g00018 224 SUPERFAMILY Homeodomain-like 76 145 IPR009057 -
Pral3970g00018 224 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 224 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Pral3970g00018 224 CDD homeodomain 81 142 IPR001356 GO:0003677
Pral3970g00018 224 SMART HOX_1 78 145 IPR001356 GO:0003677
Pral3970g00018 224 Gene3D - 80 148 - -
Pral3970g00018 224 Pfam Homeodomain 81 140 IPR001356 GO:0003677
Pral3970g00018 224 MobiDBLite consensus disorder prediction 202 224 - -
Pral3970g00018 224 ProSiteProfiles 'Homeobox' domain profile. 76 141 IPR001356 GO:0003677
Pral3970g00018 224 MobiDBLite consensus disorder prediction 54 72 - -
Pral3970g00018 224 MobiDBLite consensus disorder prediction 145 162 - -
Pral3970g00018 224 MobiDBLite consensus disorder prediction 139 162 - -
Pral3970g00018 224 FunFam WUSCHEL-related homeobox 4 80 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00018 Pral-Chr3970 153682 154812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00018 4 176 Wox Gene Family AT1G46480 62.827 2.25e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral3970g00018 Homeodomain 5.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00018 - - tcc:18591159 312.768