Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00016 ATGAGTTCACACCCTGCTGTCCGGCGTATGTCGGAATGCTTCATTAAGCCACCCCTTCCGCTCAATGGCTCTAACCCCATCTGCCATCTCTCCCCCTGGGATATTCTCATGTTGTCTGCTCATTACATTCAGAAAGGCCTCCTCTTCCTCAAGCCTTCTCCTCTCAATTCTCCCTTCTCCATCGATTCTCTTCTCCACCGCCTTAAACACTCCCTTTCTCTCACCCTCCTCCATTTTTATCCCCTCACCGGCCGCCTAGTCACCACTCGTCTCCCTTCTTACTCCATCTTTGTCGACTGCGACAACAGTGACGGGGCTAGGTTCATCTATGCCGCTTTAGACATGACCGTCTCCGACATCCTCTCCCCCACCGATGTCCCCTCCGTTGTCCAGTCGTTTTTTGACCATGACAGGGCGGTCAACCACGACGGCCACGCCTTGCCTTTGTTGTCGGTTCAGGTCACTGAATTGACAGACGGCGTTTTCATTGGCTGTTCCATGAACCACTGCCTCGCCGACGGCACTTCCTATTGGAGATTCTTCAATATGTGGTCTGAAATCTTTCGAGCACAAGACGACAACTATGACAGCGACGATGTCTGTATTCCTATCTCACACCTGCCGATTCACAATCGCTGGTTCCCAGAGGGTTGTGTTCCCCCAATCATTCTTCCCTTCAAACATCATGACGAGTTCATAAGCAGATTCGAAGCACCCCGTCTTAGAGAGAGAATATTCCATTTCACAGCCGAGTCTATTGCGAAGGTGAAAGCGAAGGCCAACCAAGATTCCAACACCACCGATATATCGTCCTTCCAATCATTATCGGCACTCGTATGGAGGTGCATAACACGCGCGCGGAGTCCCCCCCGTGATCAGAAAACAATCTGCAGGTTGGCGGCAAATAACAGATCAAGAATGGAACCGCCTTTGCCGGAAGAATACTTCGGGAACTCTATCCACGCGGTGGCTGCGGAAACGACGTCGGGGGAGTTGCTCGAGCACGACCTAGGGTGGGCGGCGTGGAAGATACACGTGGCTGTGGCGAACCACGACGACAAAGCAGTGCGTGAGCTTGTGAAGAAGTGGTTGGAGGGCCCGATGGTGTTTCAACCGGCTCGGTTCTTTGACCCGTACAGCGTGATAATGGGGAGCTCACCCAGATTCGACATGTATGGTAACGAATTTGGAATGGGGAAAGCGGTGTGTGTTCGAAGTGGGTACGCCAACAAGTTTGATGGGAAAGTGACGTCGTATCCGGGTCGTGAAGGAGAGGGAAGCATAGATTTGGAGATGTGTCTTACGCCGGCGTTGATGACGGCGCTGGAATCCGATGACGAGTTTATGAACTCTGTCTCTCTGCAAACTGTTTCGGCATTTTGA 1383 0.5221 MSSHPAVRRMSECFIKPPLPLNGSNPICHLSPWDILMLSAHYIQKGLLFLKPSPLNSPFSIDSLLHRLKHSLSLTLLHFYPLTGRLVTTRLPSYSIFVDCDNSDGARFIYAALDMTVSDILSPTDVPSVVQSFFDHDRAVNHDGHALPLLSVQVTELTDGVFIGCSMNHCLADGTSYWRFFNMWSEIFRAQDDNYDSDDVCIPISHLPIHNRWFPEGCVPPIILPFKHHDEFISRFEAPRLRERIFHFTAESIAKVKAKANQDSNTTDISSFQSLSALVWRCITRARSPPRDQKTICRLAANNRSRMEPPLPEEYFGNSIHAVAAETTSGELLEHDLGWAAWKIHVAVANHDDKAVRELVKKWLEGPMVFQPARFFDPYSVIMGSSPRFDMYGNEFGMGKAVCVRSGYANKFDGKVTSYPGREGEGSIDLEMCLTPALMTALESDDEFMNSVSLQTVSAF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00016 460 Gene3D - 10 218 IPR023213 -
Pral3970g00016 460 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 450 - -
Pral3970g00016 460 FunFam Tryptamine hydroxycinnamoyl transferase 228 445 - -
Pral3970g00016 460 Gene3D - 231 444 IPR023213 -
Pral3970g00016 460 Pfam Transferase family 10 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00016 Pral-Chr3970 140140 142406 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00016 68 443 Monolignol Biosynthesis Gene Families AT5G48930 29.353 6.14e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00016 - - gmx:100787228 660.218