Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00014 ATGAGTTCACACCCTGCTGTCCGGCGTATGTCGGAATGCTTCATTAAGCCACCCCTTCCGCTCAATGACTCTAACCCCATCTGCCATCTCTCCCCCTGGGATATTCTCATGTTGTCTGCTCATTACATTCAGAAAGGCCTCCTCTTCCTCAAGCCTTCTCCTCTCAATTCTCCCTTCTCCATCGATTCTCTTCTCCACCGCCTTAAGCACTCCCTTTCTCTCACCCTCCTCCATTTTTATCCCCTCACCGGCCGCCTAGTCACCACTCGTCTCCCTTCTTACTCCATCTTTGTCGACTGCGACAACAGTGACGGGGCTAGGTTCATCTATGCCGCTTTAGACATGACCGTCTCCGACATCCTCTCCCCCACCGACGTCCCCTCCGTTGTCCAGTCGTTTTTTGACCATGACAGGGCGGTCAACCACGACGGCCACTCCTTGCCTTTGTTGTCGGTTCAGGTCACTGAATTGACAGACGGCGTTTTCATTGGCTGTTCCATGAACCACTGCCTCGCCGACGGCACTTCCTATTGGAGATTCTTCAACACGTGGTCCGAAATCTATCGAGCACAAGGCGATAACCATGACAGCGACGATGTCTGTATTCCCATCTCACACACGCCGATTCATAATCGCTGGTTCCCAGAGGGTTGTGTTCCCCCAGTCAATCTTCCCTTCACACATCACGACGAGTTCATAAGCAGATTCGAAGCACCCCGTCTTAGAGAGAGAATATTCCATTTCACAGCCGAGTCTATTGCGAAGCTGAAAGCGAAGGCCAACCAAGATTCCAACAGTACCGAGATCTCGTCCTTCCAGTCCTTATCGGCACTCGTATGGAGGTGCCTAACACGCGTGCGGAGTCCCCCCGGTGATCAAAAAACAATCTGTAGGTTGGCGGCAAATAACAGATCAAGAATGGAACCGCCTTTGCCGGAAGAGTACTTCGGGAACTCTATCCACGTGGTGGCTGCGGAGATGACATCGCGGGAGTTGCTAGAGCACGACCTAGGATGGGCGGCCTGGAAGATACACGTGGCTGTCGCCAACCACAATGACAGAGCAGTGCGTGAGCTTGTGAAAAAGTGGTTGGAGAGGCCGATGGTGATTCAACCGGGTCAGGTCTTTGACCCCTATAGCGTGCTGATGGGTAGCTCACCCAGATTCAACATGTATGGGAATGAATTCGGAATGGGGAAAGCGGTGGGTGTTCGAAGTGGGTACGCCAACAAGTTAAATGGGAAAGTGACGTCGTATCCGGGTCGTGAAGGAGGGGGAAGCATAGATTTGGAGACGTGTCTTCCTCCGGCGTTGATGACGGCGCTGGAATCTGATGACGAGTTTATGAATTACGTGTCTCCGCAAACTGTTTCGGCGTTTTGTTCTGTTTGA 1392 0.5237 MSSHPAVRRMSECFIKPPLPLNDSNPICHLSPWDILMLSAHYIQKGLLFLKPSPLNSPFSIDSLLHRLKHSLSLTLLHFYPLTGRLVTTRLPSYSIFVDCDNSDGARFIYAALDMTVSDILSPTDVPSVVQSFFDHDRAVNHDGHSLPLLSVQVTELTDGVFIGCSMNHCLADGTSYWRFFNTWSEIYRAQGDNHDSDDVCIPISHTPIHNRWFPEGCVPPVNLPFTHHDEFISRFEAPRLRERIFHFTAESIAKLKAKANQDSNSTEISSFQSLSALVWRCLTRVRSPPGDQKTICRLAANNRSRMEPPLPEEYFGNSIHVVAAEMTSRELLEHDLGWAAWKIHVAVANHNDRAVRELVKKWLERPMVIQPGQVFDPYSVLMGSSPRFNMYGNEFGMGKAVGVRSGYANKLNGKVTSYPGREGGGSIDLETCLPPALMTALESDDEFMNYVSPQTVSAFCSV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00014 463 Gene3D - 10 218 IPR023213 -
Pral3970g00014 463 Gene3D - 231 444 IPR023213 -
Pral3970g00014 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 450 - -
Pral3970g00014 463 SUPERFAMILY CoA-dependent acyltransferases 43 195 - -
Pral3970g00014 463 Pfam Transferase family 9 449 - -
Pral3970g00014 463 FunFam Tryptamine hydroxycinnamoyl transferase 228 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00014 Pral-Chr3970 135024 142587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00014 68 407 Monolignol Biosynthesis Gene Families AT5G48930 29.508 1.20e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00014 - - gmx:100787228 663.685