Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00007 ATGAACAGTAAGGACCTGTTGGAGTCATCCACTTCGGACCAGTACGATCAGATGGACACGATGACGATGATGATGCACCTTCCTGAATTCTCTGGAGCCTACCACGACGTTGTTTCCGATGACTTTGCACTGCCTGAGCTCTCCCCGGTGGCTGCTAGGACGGACACCGACATACACGGAACTATGCTACATTTTTTGGACAACTCTCCCGTGACATCGTCGTCCTCCTTCAATAGTTTACAGTCTGCTACAATTTCCTTTACTAACCCTACTCCGACGCTTCACCAAGAGCGAGATCCGCCACCGTGCGGAGGAAACGGGTGCAGTAGAGCATCGGAGAAAGGGATGTCGATGGCGGCGATGAGGGAGATGATATTCAGGATAGCGGTGATGCAGCCGATACACATAGACCCCGAGTCAGTGAAGCCACCAAAGCGAAGGAACGTGAAGATCTCAAAGGATCCTCAGAGTGTGGCGGCTCGCCACCGTAGAGAGAGGATCAGCGAGAGGATAAGGATACTGCAGAGACTGGTTCCGGGAGGGACGAAGATGGACACAGCTTCCATGCTAGATGAAGCCATTCACTATGTGAAATTTCTCAAGTCTCAGGTTCAGTCATTGGAACGGGCTGCAGGCCGGAAGCCTCCAGGGATAGGATTTCCTGTGGCAATGTCCACTGCATCTTCCTCCTCGTATCTTGCCATCCCATCAAAACCTTGCCAATTTCCTACTCAAGATGTTCCGCATTTCGGACATGATGCGTGGTAG 768 0.5182 MNSKDLLESSTSDQYDQMDTMTMMMHLPEFSGAYHDVVSDDFALPELSPVAARTDTDIHGTMLHFLDNSPVTSSSSFNSLQSATISFTNPTPTLHQERDPPPCGGNGCSRASEKGMSMAAMREMIFRIAVMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAAGRKPPGIGFPVAMSTASSSSYLAIPSKPCQFPTQDVPHFGHDAW 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00007 255 CDD bHLH_AtIND_like 152 208 - -
Pral3970g00007 255 FunFam BHLH transcription factor 154 216 - -
Pral3970g00007 255 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 155 211 IPR036638 GO:0046983
Pral3970g00007 255 MobiDBLite consensus disorder prediction 88 110 - -
Pral3970g00007 255 Gene3D - 150 214 IPR036638 GO:0046983
Pral3970g00007 255 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 72 230 IPR045843 GO:0003700|GO:0006355
Pral3970g00007 255 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 200 IPR011598 GO:0046983
Pral3970g00007 255 SMART finulus 157 206 IPR011598 GO:0046983
Pral3970g00007 255 Pfam Helix-loop-helix DNA-binding domain 161 200 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00007 Pral-Chr3970 71793 72942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00007 107 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 87.619 1.19e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral3970g00007 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00007 - - tcc:18591179 228.024