Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3969g00003 ATGAACTTCGGAAACGACCATGGGGGCGGAAACACCGGCGGGGGAAGGCCACCGGCAAATTTTCCACTAGTACGACAGTCGTCAGTCTACTCCTTGACATTCGATGAGTTTGTGAGTACTATGGGAGGTTCGGGGAAGGACTTTGGGTCGATGAATATGGATGAGTTGCTCAAGAACATCTGGAGTGCTGAAGAGGTTCAAACAATGGCTTCCCTGAGTAGTGCTCAACAGGGTGGAAGTGCCTCTGGCGGACATTTGCAGAGACAAGGCTCCTTGACGTTGCCGCGAACACTTAGCCAGAAAACCGTAGACGAGGTTTGGAAGGATATTTCCAAGGACTATGGTGCGGCGGGGAAGGACGCTCCAAACATGCCACAGAGGCAGCAGACTTTGGGAGAGATGACGTTGGAAGAGTTCTTGGTGAGAGCCGGGGTTGTCAGAGAAGATGCACAAGCACAGTTGATGGGAAAGCCAAATGGCGGGGATTTCCCCGATTTATCTCGTACTGGAAATAATAGTGGTATAGGATTGAGTTTTCAGCAGATGAATAAGGGTACTGGCTTAATGGCAAACCAAATTACAGGGAATAATGACCAACTATCTCTTCAGTCTCGCACCAATTTGCCATTGAATGTAAACGGTGCTAGATCGAATCAGCAACAGCTGCCGAATTCGAAGTCACCACAGCCACAGATATTTCCCAAGCAGCCTGCCATGCCTTATGCTGGTCAGATACCATTAACGAACAACAACCAGCTAGGTAATCAGGGAATGAGAGGTGGAATGGCGGGTATTGTGGACCAGGGTCTGAATGGTAATCTGGTTCAGAGTTCTGCACTGCAAAGTGGAGGGATGGGTATGGTTGGTTTAGGACCTGGGGCTGTTCGCGTAGCTACAGGCTCACCAGCTAATCAGCTGTCTTGCGATGAAATTGGAAAGAGTAATGATGACAATTCGTCAGTGTCGCCCCTTCCTTACGTGTTCAATGGTGGTTTAAGAGGGAGGAAAAGCAGTGGAGCTGTGGAGAAAGTTATTGAGAGGAGGCAGAGGAGAATGATTAAAAACAGAGAGTCTGCTGCTCGGTCCCGCGCTCGCAAGCAGGCCTATACCATGGAATTGGAGGCAGAGGTTGCAAAGTTAAAAGAGGAGAATGAAGAGCTTAAGAGGAAGCAGGCAGAAATCATGGAGATGCAAGAGAATCAAGTAAAGGAGATGACGAATTTGCAGCAAGGGGCTAAGAAAAGGTGCTTAAGACGAACACAAACTGGACCATGGTAG 1278 0.4875 MNFGNDHGGGNTGGGRPPANFPLVRQSSVYSLTFDEFVSTMGGSGKDFGSMNMDELLKNIWSAEEVQTMASLSSAQQGGSASGGHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGAAGKDAPNMPQRQQTLGEMTLEEFLVRAGVVREDAQAQLMGKPNGGDFPDLSRTGNNSGIGLSFQQMNKGTGLMANQITGNNDQLSLQSRTNLPLNVNGARSNQQQLPNSKSPQPQIFPKQPAMPYAGQIPLTNNNQLGNQGMRGGMAGIVDQGLNGNLVQSSALQSGGMGMVGLGPGAVRVATGSPANQLSCDEIGKSNDDNSSVSPLPYVFNGGLRGRKSSGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELKRKQAEIMEMQENQVKEMTNLQQGAKKRCLRRTQTGPW 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3969g00003 425 Coils Coil 363 415 - -
Pral3969g00003 425 MobiDBLite consensus disorder prediction 1 22 - -
Pral3969g00003 425 Gene3D - 345 415 - -
Pral3969g00003 425 MobiDBLite consensus disorder prediction 405 425 - -
Pral3969g00003 425 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 425 IPR043452 GO:0003700|GO:0045893
Pral3969g00003 425 CDD bZIP_plant_BZIP46 347 398 - -
Pral3969g00003 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 350 365 IPR004827 GO:0003700|GO:0006355
Pral3969g00003 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 345 396 IPR004827 GO:0003700|GO:0006355
Pral3969g00003 425 MobiDBLite consensus disorder prediction 71 97 - -
Pral3969g00003 425 SMART brlzneu 343 407 IPR004827 GO:0003700|GO:0006355
Pral3969g00003 425 SUPERFAMILY Leucine zipper domain 347 396 IPR046347 GO:0003700|GO:0006355
Pral3969g00003 425 Pfam bZIP transcription factor 347 400 IPR004827 GO:0003700|GO:0006355
Pral3969g00003 425 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 345 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3969g00003 Pral-Chr3969 10577 20471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3969g00003 21 425 bZIP Transcription Factor Family AT3G19290 46.469 1.16e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral3969g00003 bZIP_1 4.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3969g00003 K14432 - qsa:O6P43_018931 582.408