Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00056 ATGGCCTTAGCAACTGGAGGAAGCTTCCCTTTGCAGCCATGCTCTTTATTGAAAAACGCGAGCATTAATAAATCTCCAGCAGGCGGCACATCCTCGTGGCTCAGGCATGCTGGTGCAGAGATTACAAGGCCTTGTAGGCGAACTTGTATTGCAGCTCAACAACGACCTACGTGGCTCCCAGGACTCGATCCTCCCCCTTATCTTGATGGAACTCTGGCTGGAGATTTTGGGTTCGATCCACTGGGACTTGGAGAAGACCCGGCAAGCTTGAGGTGGTATGTGCAAGCAGAGCTGGTTCATGCTCGCTTTGCAATGATTGGGGTCTCTGGAATTCTGCTCACAGATACGCTTCGCTTCGCAGGACTTAAAACGATACCAGTTTGGTATGAGGCCGGTGCAGAAAAATATTTTGCTGATGCTAAGACTCTGCTCATTATCCAGCTATTTTTGATGGGCTTTGTTGAAACAAAAAGGTACATGGATTTCGTTAGTCCAGGATCTCAAGCTAAAGAGGGATCCTTCTTTGGACTGGAAGCTGCATTTGAAGGTCTAGAACCAGGGTACCCTGGAGGTCCTTTGCTAAATCCTCTTGGCCTAGCTAAAGATATAAAGAACGCTCACGAATTGAAACTTAAAGAGATCAAGAACGGGAGACTTGCTATGGTCGCAATGCTTGGAATCTTTGTGCAAGCTTCAGTGACTCATGTTGGACCAATTGATAACCTCGTGGCACATCTTTCCAATCCATGGCACAAAACTATTGTTCAGACCCTTGGCAGCTCTAGTTAA 789 0.4702 MALATGGSFPLQPCSLLKNASINKSPAGGTSSWLRHAGAEITRPCRRTCIAAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLGLGEDPASLRWYVQAELVHARFAMIGVSGILLTDTLRFAGLKTIPVWYEAGAEKYFADAKTLLIIQLFLMGFVETKRYMDFVSPGSQAKEGSFFGLEAAFEGLEPGYPGGPLLNPLGLAKDIKNAHELKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVAHLSNPWHKTIVQTLGSSS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00056 262 SUPERFAMILY Chlorophyll a-b binding protein 49 258 - -
Pral3968g00056 262 Gene3D Chlorophyll a/b binding protein domain 65 251 - -
Pral3968g00056 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 49 257 IPR001344 GO:0009765|GO:0016020
Pral3968g00056 262 FunFam Chlorophyll a-b binding protein, chloroplastic 56 262 - -
Pral3968g00056 262 Pfam Chlorophyll A-B binding protein 64 231 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00056 Pral-Chr3968 280104 281811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00056 41 254 Chloroplast and Mitochondria Gene Families AT3G61470 47.005 1.06e-64 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00056 K08911 - gmx:100804934 374.785