Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00048 ATGTCTGCAAGGAATGAACACCATACCGTCCCCCTTTCGGTGCTTCTGAAGCGGGAATTGGCAAACGAGAAAATTGAGAAACCAGAAATTATGCATGGTCAAGCCAGCCAGAGCAAAAAAGGCGAAGATTTCACGCTAGTAAAGACGGAATGCCAAAGGGTGGTGGGAGATGGGGTGTCTACTTATTCTGTTTTTGGGTTGTTTGATGGGCACAATGGATCTGCTGCTGCGATTTATGCTAAGGAGAATCTCTTAAATAATGTTTTAAGTGCGGTTCCCCCAGATCTTAACAGAGAGGAGTGGGTGTCAGCAATGCCTAGGGCTCTGGTTGCAGGCTTTGTCAAAACTGATAAAGATTTTCAAGAGAAAGGACAAAAATCAGGAACAACAGCAACCTTTGTGATTATTGAAGGATGGGTTGTTACAGTTGCATCAGTTGGTGATTCTCGTTGCATACTTGAGCCTTCTGAAGGTGGGATATATTACTTGTCAGCAGATCATAGGCTAGAAACTAATGAAGAGGAGAGGGAACGTATAACTGCTAGCGGGGGTGAGGTTGGTCGTCTAAATACTGGTGGAGGTGCACAGGTTGGTCCTTTGAGGTGTTGGCCTGGCGGCTTGTGTCTTTCGAGATCCATTGGTGATATGGATATTGGTGAATATATTGTCCCTGTACCTTATGTGAAGCAAGTGAAGCTGTCCACCGCTGGAGGCAGGCTTATTATCTGCAGTGATGGTGTTTGGGATGCTTTGACTGCAGAAGCAGCCCTTGATTGTTGTCGTGGCATGGCAGCAGATGTTGCAGCATCCCTTCTTGTTAGAGAAGCTTTACAAGCAAAGGGACTTAGAGATGATACTACCTGCATTGTTGTTGATATATTACCTCAGGAGAAGCCACCTGCTCCTGTGCAACAACCGAAAAAGGCAGGAAAAATGTTTAAGGCAATGTTTCGCAAAAAGTCCTCTGAATCATCTTCTTGTAATGACAAAGAGTATGTGGAACCAGATGTGATAGAGGAACTTTACGAGGAAGGATCTGCTATGCTTTCAGAGAGGTTAGATACAAAATACCCACTCTGCAACATGTTCAAGTTGTTTGTTTGTGCGGTATGTCAAAAGGAGATCAAACCTGGAGAGGGTATTTCAATCCATGCGGGTGTATCCAACCCAGGAAAATTGCGTCCCTGGGATGGACCTTTTCTTTGTTTAAGTTGCCAGGAAAAGAAAGAAGCAATGGAAGGGAAAAGAACATCAGATAGACTGAGCAGTGGAAGTGACTGA 1281 0.4457 MSARNEHHTVPLSVLLKRELANEKIEKPEIMHGQASQSKKGEDFTLVKTECQRVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAVPPDLNREEWVSAMPRALVAGFVKTDKDFQEKGQKSGTTATFVIIEGWVVTVASVGDSRCILEPSEGGIYYLSADHRLETNEEERERITASGGEVGRLNTGGGAQVGPLRCWPGGLCLSRSIGDMDIGEYIVPVPYVKQVKLSTAGGRLIICSDGVWDALTAEAALDCCRGMAADVAASLLVREALQAKGLRDDTTCIVVDILPQEKPPAPVQQPKKAGKMFKAMFRKKSSESSSCNDKEYVEPDVIEELYEEGSAMLSERLDTKYPLCNMFKLFVCAVCQKEIKPGEGISIHAGVSNPGKLRPWDGPFLCLSCQEKKEAMEGKRTSDRLSSGSD 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00048 426 SMART PP2C_SIG_2 54 293 IPR001932 -
Pral3968g00048 426 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Pral3968g00048 426 PANTHER PROTEIN PHOSPHATASE 31 292 IPR015655 GO:0004722|GO:0006470
Pral3968g00048 426 Gene3D - 31 299 IPR036457 -
Pral3968g00048 426 Pfam Protein phosphatase 2C 57 277 IPR001932 -
Pral3968g00048 426 SUPERFAMILY PP2C-like 37 293 IPR036457 -
Pral3968g00048 426 SMART PP2C_4 21 291 IPR001932 -
Pral3968g00048 426 CDD PP2Cc 39 293 IPR001932 -
Pral3968g00048 426 FunFam probable protein phosphatase 2C 12 32 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00048 Pral-Chr3968 234490 239704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00048 1 426 PP2C-type Phosphatase Gene Family AT1G47380 78.972 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00048 - - cave:132183890 736.873