Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00034 ATGGGGCCATCTGGAGGTGGTAAAACAACATTACTCAATATCTTGAGCGGCAGGACCAAGTTTAACGGCGGGTCTATCACTTACAATGACGAACCATATACCAAGTCATTAAAGCAGAGGATTGGATATGTAACACAAGATGATGTTGTGTTCCCTCATCTTACAGTCAAGGAAACTCTCACATATGTAGCTTTGCTCCGTCTCTCGAAGGATCTATCAATGACACAGAAAAAAGAGAGGGTTATGAATGTTTTAAGTGAACTATGCCTCGAAAGATGCCAAGACACAGCAATTGGCGGCAAATTTATCAGAGGGGTTTCTGGTGGTGAGAGGAAAAGGGTCTGTATTGGCACAGAAATCCTGCTCAACCCATCACTTCTGTTCTTGGATGAACCAACATCTGGTCTAGATTCAACCACAGCATCACGAATTGTTCAGATTCTTCAAAACATTGCAAAAGAGGGAAAGACAGTATTGACAACAATACACCAGCCGTCAAGTAAGCTGTTCAGCATGTTTGACAAATTGATTCTGTTGGGAAAAGGGAGCACCTTGTACTTTGGAAAAGCATCTGATGCAATGATGTATTTCTCCTCTATTGGTTGCTCTCCATTGATAGCCATGAACCCTGCGGAGTTCCTCATTGACCTTGCAAATGGCAACATAATTGACAAATCTGTCCCTTCAGAACTTGAGGATAAGTTCCATTATGGAATCAAAAAACTCAACATAAAAAACAACACACCCTCCCCAGTTGATGTACACGAGTTTCTTGTTAAGGCCTATGAAATAAGGCTTGCGAAAAGTGACAAAGCAATGCTTCTCGAACCTGTAACAAGAAGGGGAGATCAGAGTGGGATGCAAGGCAGGCCATTCCTGAGGGACTTTGGAGCAACTTGGTCTCAACAATTTTGCATTCTCTTCATGAGGGGCATTAGGGAGAGGCGTCATGAGTATTTCAGCTGTCTGCGTGTAACCCAAGTAATATCAACTGCAATTATTGTTGGACTACTTTGGTGGAACTCTGATGCTTCTTCTCACAAGAGTCTCCATGATCAGGCAGGGCTACTGTTCTTCCTTTCTGTGTTCTGGGGCTTCTATCCGCTATTTAGTGCCATCTTCATGTTCCCACAAGAAAGAGCAATGCTAGTGAAAGAGAGATCGATTGACATGTATAAACTCAGTGCTTACTTCTTAGCTAAGAACACCAGTGATGTTCCAATGGAGCTTCTAATGCCTCCAGTGTTCTTAGTGATTGTGTATTTCATGGTTGGCTTGAAGCTACAATTTTCTGCATTTTCCCTCACCATCCTCACAATTTTTCTGAGTGTTCTGGCAGCTCAGGGTCTGGGACAAGCCATAAGTGCAGCATTTCTAGATGTGAAGAAAGCTACAACACTGGCCTCAATCGTTGTCATGACCTTCATGCTAACCGGTGGATTCTTTAGCCAACAAGTCCCAAGGTTTATGTCATGGGTACGCTACGTCTCTTTCAACTACCACACTTACAGGTTGCTTTTGAAAATTCAATATGGATGTGTGGTTTCAACTTCTGCATCAGGTTGCAGTGAGTCTCCTTTAGATAAAAAGAGGGAGACTATACTCGGGAGAGGACTGGAAGTTGGTGCTATGATAATAATGATAATTATTTATCGGCTTATAGCGTATTTATTTCTAAGGAGAATGAATATAAGGACTAAATGA 1704 0.4219 MGPSGGGKTTLLNILSGRTKFNGGSITYNDEPYTKSLKQRIGYVTQDDVVFPHLTVKETLTYVALLRLSKDLSMTQKKERVMNVLSELCLERCQDTAIGGKFIRGVSGGERKRVCIGTEILLNPSLLFLDEPTSGLDSTTASRIVQILQNIAKEGKTVLTTIHQPSSKLFSMFDKLILLGKGSTLYFGKASDAMMYFSSIGCSPLIAMNPAEFLIDLANGNIIDKSVPSELEDKFHYGIKKLNIKNNTPSPVDVHEFLVKAYEIRLAKSDKAMLLEPVTRRGDQSGMQGRPFLRDFGATWSQQFCILFMRGIRERRHEYFSCLRVTQVISTAIIVGLLWWNSDASSHKSLHDQAGLLFFLSVFWGFYPLFSAIFMFPQERAMLVKERSIDMYKLSAYFLAKNTSDVPMELLMPPVFLVIVYFMVGLKLQFSAFSLTILTIFLSVLAAQGLGQAISAAFLDVKKATTLASIVVMTFMLTGGFFSQQVPRFMSWVRYVSFNYHTYRLLLKIQYGCVVSTSASGCSESPLDKKRETILGRGLEVGAMIIMIIIYRLIAYLFLRRMNIRTK 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00034 567 ProSitePatterns ABC transporters family signature. 106 120 IPR017871 GO:0005524|GO:0016887
Pral3968g00034 567 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 556 - -
Pral3968g00034 567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 195 IPR027417 -
Pral3968g00034 567 Pfam ABC transporter 1 134 IPR003439 GO:0005524
Pral3968g00034 567 Pfam ABC-2 type transporter 302 511 IPR013525 GO:0016020|GO:0140359
Pral3968g00034 567 Gene3D - 1 199 IPR027417 -
Pral3968g00034 567 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 206 IPR003439 GO:0005524
Pral3968g00034 567 Pfam ABC-2 type transporter 163 226 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00034 Pral-Chr3968 185399 188079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00034 1 220 Calmodulin-binding Proteins AT2G36910 27.556 1.82e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00034 K05681 - jre:109005390 808.52