Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00029 ATGGACCACTTGATAACTTTGTTAGTAGCCTTCGTCATTGGGGCAACTTTCGTGAGTGTTGGTGCCGAGCCAGTGGAAGATAAAAAAGCGTTGCTTGATTTCTATCGCAATATCGATCAGTCTCATCCTCTCAACTGGGATGAGAATTCTTCTGCATGCAAAAGCTGGAGAGGGGTGTTCTGCAACAAAGAACAATCCAGGGTCATAGCTCTCCATTTACCTGGAGCTGGGTTCAGTGGTCCGATCCCATCTAACACGCTTAGCCGTCTCTCAGAACTTCATACCTTGAGTCTTAGATCCAATAGAATAACGGGTCCTTTTCCTTCTGATTTCTCTGAGCTTAAAAATTTGAGTTACGTTTATCTCCAATTCAACAAGTTTTCCGGCCCATTACCATCGGATTTTTCCGTTTGGAATAATCTTAATGTTATCGATTTATCCAATAATTCTTTTAATGGAGGCATCCCTTCTTCCATTAGAAAATTGACTCATCTCACAACTCTAGTCTTAGCCAACAACTCGCTTTCCGGGGAAATTCCTGACCTCGATATTCCTAGCCTAAAAGTGCTCAATTTAGCGAACAACCACCTTAGTGGGGTTGTGCCTAAATCCCTCGAGAGATTTCCACGTTCAGCTTTTGCTGGTAACAACAATCTTACAAAAGAAAATTCACTTCCTCCTGCTATTCCACTTCAACCACCGAATGCTCCTCCGAAAAAGAAAACCACACTAAGCGAGCCCGCATTATTGGCTATTATCATTGGCGGCTGTGTGCTATTTTTTCTGGTGATTGCAGTTCTCATGCTTATCCGCAGCTATCAGAAAGGAAATGAGGAAGTGCCAGCCGTGAAGTCAAAGAAAAAGGAAGACACTCTGAAAAAAGAAGCATCTGAAACTGAAAGTCAAGACAAGAACAAGATTGTGTTTTTTGAGGGTCGCCATCTTGCCTTTGACCTGGAAGACCTGTTGAGATCATCTGCTGAGGTACTAGGAAAAGGAACCTTCGGAACAACATATAAGGCTGCTCTAGACGATGTAACCACGGTGGTGGTGAAGAGATTGAAAGAAGTAGTGGTCGGAAAACGTGAGTTTGAACAGCAGATGGAGGTGGTGGGGAGGATTAGGCATGATAATGTGGCTCCACTGAGGGCATATTATTATTCCAAGGAAGAAAAACTTATGGTGTATGATCACTTCGAAGAGGGTAGCGTTTCTGCAATGTTGCATGGTAGAAAAGCGGAAGGCAGGGCTTCTTTAGACTGGGATAGCCGGCTGAGAATTGCCATTGGTGCAGCAAGAGGGATGGCTCACATCCACACAAAACATGCAGGGAAACTAGTACATGGGAACCTAAAAGCCTCAAACGTCTTCTTAAACTCTCAAGGATATGGTTGTGTGTCTGATGCAGGTTTGACCACATTAACAAGCTCAATACCCTTCCCAGCACAGAGAACTGGAGGGTACCGGGCGCCGGAAGTAACAGACATCAGAAAAGCGACCCACGCTGCTGATGTATACAGTTTTGGGGTGCTGGTGCTTGAGCTTCTCACTGGGAAATCACCCATACATGCCACAGGGAGCGAGGAGTTGGTGCATCTGGTTAGGTGGGTGAATTCCGTGGTGAGAGAGGAGTGGACTGCGGAGGTGTTTGATGTTGAGTTGCTGAGATATGCAAATATTGAGGAAGAAATGGTAGAGATGTTGCAGATAGGGATGGCTTGCGCGGTGAGGGTGCCAGAACGGAGACCAAAAATGCAAGATGTTGTGAGAATGCTGGAGGAAGTTCGCAAAGTGAATACTGGAACCCAATCATCCACTGAAGGTTCCACCCCGACCCCACAAGCAATTATTCATGCACCTTCTTCATCTGTTCCCCAACAAGATTCCGTCGTTGTTTAG 1899 0.4539 MDHLITLLVAFVIGATFVSVGAEPVEDKKALLDFYRNIDQSHPLNWDENSSACKSWRGVFCNKEQSRVIALHLPGAGFSGPIPSNTLSRLSELHTLSLRSNRITGPFPSDFSELKNLSYVYLQFNKFSGPLPSDFSVWNNLNVIDLSNNSFNGGIPSSIRKLTHLTTLVLANNSLSGEIPDLDIPSLKVLNLANNHLSGVVPKSLERFPRSAFAGNNNLTKENSLPPAIPLQPPNAPPKKKTTLSEPALLAIIIGGCVLFFLVIAVLMLIRSYQKGNEEVPAVKSKKKEDTLKKEASETESQDKNKIVFFEGRHLAFDLEDLLRSSAEVLGKGTFGTTYKAALDDVTTVVVKRLKEVVVGKREFEQQMEVVGRIRHDNVAPLRAYYYSKEEKLMVYDHFEEGSVSAMLHGRKAEGRASLDWDSRLRIAIGAARGMAHIHTKHAGKLVHGNLKASNVFLNSQGYGCVSDAGLTTLTSSIPFPAQRTGGYRAPEVTDIRKATHAADVYSFGVLVLELLTGKSPIHATGSEELVHLVRWVNSVVREEWTAEVFDVELLRYANIEEEMVEMLQIGMACAVRVPERRPKMQDVVRMLEEVRKVNTGTQSSTEGSTPTPQAIIHAPSSSVPQQDSVVV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00029 632 Gene3D Ribonuclease Inhibitor 25 235 IPR032675 -
Pral3968g00029 632 SUPERFAMILY L domain-like 38 208 - -
Pral3968g00029 632 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 399 606 - -
Pral3968g00029 632 SUPERFAMILY Protein kinase-like (PK-like) 327 593 IPR011009 -
Pral3968g00029 632 FunFam Probable inactive receptor kinase RLK902 24 183 - -
Pral3968g00029 632 MobiDBLite consensus disorder prediction 597 632 - -
Pral3968g00029 632 FunFam pollen receptor-like kinase 1 293 398 - -
Pral3968g00029 632 MobiDBLite consensus disorder prediction 216 240 - -
Pral3968g00029 632 ProSitePatterns Protein kinases ATP-binding region signature. 330 361 IPR017441 GO:0005524
Pral3968g00029 632 ProSiteProfiles Protein kinase domain profile. 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3968g00029 632 Gene3D Phosphorylase Kinase; domain 1 289 398 - -
Pral3968g00029 632 Pfam Protein tyrosine and serine/threonine kinase 328 592 IPR001245 GO:0004672|GO:0006468
Pral3968g00029 632 Gene3D Transferase(Phosphotransferase) domain 1 399 612 - -
Pral3968g00029 632 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Pral3968g00029 632 Pfam Leucine Rich Repeat 186 207 IPR001611 GO:0005515
Pral3968g00029 632 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Pral3968g00029 632 PANTHER OS05G0588300 PROTEIN 8 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00029 Pral-Chr3968 161883 165155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00029 22 607 Receptor kinase-like Gene Family AT4G23740 52.736 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral3968g00029 PK_Tyr_Ser-Thr 7.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00029 - - aprc:113851984 842.417