Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00020 ATGGACAAAGTCAACATGGGAGAGTGGGAGAGTCGGCTTATCAACGAGCTAGTACAAGGCAGGGAGCTGGCAAGGCGACTTCAGATGTGCCTCCACTCGCCGTCTTCCTCCCCAGAAACCTGCGAGTTCTTGATCCAGAGAATCATAGCCGCATTTGAAAAGGCACTTGCAACGGTAAACTGGAATGGTGACGCATCGCACCTCACACGGGTCGGAATCGTCCCAACTTCTGAGTCACCACCTTTTAGTGGCAGTCCTCGCAGCGAAGACTCTGACAGGGATTTCCAAGACCAAAGTGCCTCCAAAAAGAGAAGAAGCATGCCCAGGTGGACAAAACAGATTAGAGTTAGCCCAGGGATGGGGGTGGAAGGGACTCTTGACGACGGATATAGCTGGAGGAAATACGGCCAGAAAGAGATTCTTGGAGCCAAGTTTCCCAGAGGCTATTACAGATGCACCCATAGAAATGTTCAAGGATGCTTGGCCACGAAGCAAGTGCAAAGATCTGATGAGGACCCCAACGTATTTGAAATCACCTACAGAGGAACGCACACCTGCTCACAGTCATCCAATGCGGTTGCTCCATCTGGCACTCAAGAAAGCCATGAACTGAATCCGAATGCTGTAGATCCTCAGCAACATTCACAAGAGCAACTACTTTTGAACCTTCGAGCTGGTCTGAGAGTCCAAACCGACAATCTAGATGTCCCCGCCCCGGAGCAATCCTCATCGTTTACCTCACTTATATTTGGTTCAACCTCCTCCATTATGGATCACGAAAACCGAATGTTTACAAGCTCCATGCTCGAAAACAATTTTGCCGACAACCTCACTTCTGATCCTTCCTATATGTCCCCAGCCACATCAGGAATAACCAGCTTTTCCGTGTCCCCAAGTGGAGGAGTCAATAACATGTTTGGTGAGATGCCAAATATGGCAACTACTTCTGGGTCTGAGATCAACGACATAGTCTCAGCCGTTACTTCCGCCGCAAATTCCCCAACCGTTGGTTTAAACCTTCCATTTGATCAGTTCGGATATGATGGACACAGCTTCACTTTTGATAACCAGCGATTCTTCTAA 1083 0.4866 MDKVNMGEWESRLINELVQGRELARRLQMCLHSPSSSPETCEFLIQRIIAAFEKALATVNWNGDASHLTRVGIVPTSESPPFSGSPRSEDSDRDFQDQSASKKRRSMPRWTKQIRVSPGMGVEGTLDDGYSWRKYGQKEILGAKFPRGYYRCTHRNVQGCLATKQVQRSDEDPNVFEITYRGTHTCSQSSNAVAPSGTQESHELNPNAVDPQQHSQEQLLLNLRAGLRVQTDNLDVPAPEQSSSFTSLIFGSTSSIMDHENRMFTSSMLENNFADNLTSDPSYMSPATSGITSFSVSPSGGVNNMFGEMPNMATTSGSEINDIVSAVTSAANSPTVGLNLPFDQFGYDGHSFTFDNQRFF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00020 360 MobiDBLite consensus disorder prediction 187 209 - -
Pral3968g00020 360 FunFam WRKY transcription factor 53 112 189 - -
Pral3968g00020 360 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 262 IPR044810 GO:0003700
Pral3968g00020 360 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3968g00020 360 Gene3D WRKY domain 120 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3968g00020 360 MobiDBLite consensus disorder prediction 72 114 - -
Pral3968g00020 360 MobiDBLite consensus disorder prediction 87 104 - -
Pral3968g00020 360 ProSiteProfiles WRKY domain profile. 121 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3968g00020 360 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3968g00020 360 Pfam WRKY DNA -binding domain 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3968g00020 360 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00020 Pral-Chr3968 101244 103128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00020 7 227 WRKY Transcription Factor Family AT5G24110 45.726 1.38e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3968g00020 WRKY 1.2e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00020 - - gmx:100776906 365.54