Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00011 ATGAAATACATGTTTCTTTTTATTGTCACTCTCAGGATTACCAAGAAGAAGCTAAGCAAGCTGCAAGAGGCAATGGGATTCCAAACACCCCATTCAAGTAAACCCAAAGTGCAACCTGTTACCAAACCCATTCCCTCGTCCTACGATTCATGGATGGCGAGGCATCCTTCAGCGCTGCGTTCATTTGATAGACTGATGAAAGCAGCAAGTGGAATGGACGTGGTTGTGTTTTTAGACTATGATGGCACCTTGTCACCCATTGTAAATGACCCTGATCGTGCTTTTATGTCTGAGGAGATGCGTGCAGCAGTGTGTGAAGTTGCTAGAAATTTCCCAACTGCAATAATTAGTGGAAGAAGCAGAGACAAGGTTAAAGAATTTGTCAAGTTAAATAATGTGTATTACGCTGGAAGTCATGGGATGGATATAATGGCACCATCAGCGACAGCTAGATCCTCTGATGGCGACCATTATAACATGGCCCTCGACACCACTAAGGATAATGGGGTTCCCTTTCAACCTGCGAAGAAATTTTTGCCCGCAATTCGAGAGATATTGAAGGTATTAGAGAATAAAATAAAAGGCATACAAGGTGCAAGGATAGAGGACAATGGATTCTGCATTTCTGTACACTTCCGGCAAGTTCAAGAAAAGGACTATGTTGAATTAGAGGAGAAGGTGAAGTCCGTGCTTGAAAAACACCCAGACTTTTGCCTAACTGAGGGTAAAAAGGTTCTGGAAATAAGGCCATCCATAGAATGGAACAAAGGGCACGCCCTGGAATATTTTCTGGACACACTAGGATTAAGCAGTTCCAGCAACATCCTTCCAATCTACATTGGTGATGATCGAACCGATGAAGATGCTTTTAAGGTGATACAGAAGAGAGGACAAGGCTATCCAATTATAGTATCTTCAATTCCGAAGGACACCAAAGCTCTCTACTCTCTGCGAGACCCGTCAGAAGTGCTAATTTTCTTGTCACGTCTGGCGAAATGGAGGAAAACCATTATTGGCTTGAATTAA 1026 0.4279 MKYMFLFIVTLRITKKKLSKLQEAMGFQTPHSSKPKVQPVTKPIPSSYDSWMARHPSALRSFDRLMKAASGMDVVVFLDYDGTLSPIVNDPDRAFMSEEMRAAVCEVARNFPTAIISGRSRDKVKEFVKLNNVYYAGSHGMDIMAPSATARSSDGDHYNMALDTTKDNGVPFQPAKKFLPAIREILKVLENKIKGIQGARIEDNGFCISVHFRQVQEKDYVELEEKVKSVLEKHPDFCLTEGKKVLEIRPSIEWNKGHALEYFLDTLGLSSSSNILPIYIGDDRTDEDAFKVIQKRGQGYPIIVSSIPKDTKALYSLRDPSEVLIFLSRLAKWRKTIIGLN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00011 341 FunFam Trehalose 6-phosphate phosphatase 180 338 - -
Pral3968g00011 341 NCBIfam trehalose-phosphatase 75 332 IPR003337 GO:0003824|GO:0005992
Pral3968g00011 341 SUPERFAMILY HAD-like 75 336 IPR036412 -
Pral3968g00011 341 Gene3D - 170 338 IPR023214 -
Pral3968g00011 341 Gene3D - 74 167 IPR023214 -
Pral3968g00011 341 Pfam Trehalose-phosphatase 77 321 IPR003337 GO:0003824|GO:0005992
Pral3968g00011 341 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 17 336 IPR044651 GO:0004805|GO:0005992
Pral3968g00011 341 CDD HAD_TPP 75 323 - -
Pral3968g00011 341 NCBIfam HAD-IIB family hydrolase 76 294 IPR006379 -
Pral3968g00011 341 Coils Coil 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00011 Pral-Chr3968 43483 46215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00011 76 337 Trehalose Biosynthesis Gene Families AT4G17770 25.912 7.69e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00011 K01087 - gmx:100819120 495.352