Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00010 ATGATGGATTGCAACAAGGATGAGGCTGTTAGGGCCAAGGAAATAGCAGAGAAGAAATTTTCAGACAGGGAATATGCTGGTGCTAAGAAGTTTGCTCTCAAGGCTCTAAATTTATATCCTGCACTGGATGGTCTTTCACAGTTTTTGACCAACCTTGATGTTTATATCTCTGCTGAGAATAAAGTTAGTGGAGAAATGGATTGGTATGGTATACTGGGAGTGAACCCCTTTGATGATGAAGAGACAGTTAGAAAACAGTACAGGAAGCTGGCTCTCACTCTTCACCCGGATAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTGTCAGATAAAACCAAGAGACTAGAATATAACCTGAAGAGGAGTTTGAAAGGTTTTCAACATAAAACACCTAACCATGCTGGATCTCAATCAGAAGTACCTGGTTCAAATGGTTTTTATAATCTTAACAAGAATGTAACTTCAAATGTGAGGGCTGGAAATAGTAATTCCCAGGCACGCCATGGCTCGGCTCCTCGTCCACAGAAGAAGGCTGACACCTTTTGGACTATTTGTAATCGATGCAGGACTCATTATGAATACCTTAGGGTTTATTTGAATCATAGACTTCTATGTCCCAATTGTAATGAGGCTTTCTTGGCTATAGAGAAGGAGCCACCTCCCAACTATTTCAAATCAGCAAATTGGTCTTCTCGCCAGCAGCATCAAAGTTCTCGACATCACGCTTCAAGTAATAATCAAGCTAATGCTGGAAAAAACTTTACAGTTTCTCAAAATTCAGAAGCCATTGGTACTTCAGGCATGTCGTCATATGGTAAAGCAAGTTATCAATGGGGTCCTCACTCTAGCATGGCTGGTTTTGGTGGTATGGATGGATCATCGTCTGTTGCTGCTCAAGCTGCAAGTGTTGTGCAGCAGGCTAGTGAGAAAGTCAGAAGGGAACGTGAGGGAGCACCGTCAATTGCTGAATGGGAGAGGAGTCAAATGTCTAAGAGGACTGATGGTTCTTTTCATAAAGGGGAGAAATCTTGGAAGAAGAGAAGGACAGATGATATCGGTATGAATGGTATTAAAGGATACATGGCAAACCATATGACCGCGGGACAAGGAGCAGCTGGTATGGGATATGCTTCTGATTTGAGAAAAGCTAACTGGGAAACTGAAAGAAGCTATGGTTTCTCAGGCATGAAGCCTAACAGTACGAGAGAGTTGTCATTGTTTGAAATCCGAAATATGTTGGTGGATAAAGCACAAAGTGAAATTCGCAAGAAACTTGAAGAATGGAAATTGGTGGCGCAATCTAAGATCACAAGCAAGTCCAAAGAGAATAAGAAACAAAAAAGCACATTGACTGCTAAAACATCTGATTCGAAGAAGCATAAAGACTCCATTCTTGATAATAGCTGTCATGTAGAAGGTGATTCTTTCCCTGTCACATCTGATAATACCGTTAAGGAGGATCAATCCTACATCATAATGAATGTTCCAGACCCTGATTTCCACAATTTTGACGTGGATAGAACTGAGAATGCCTTTGCTGAGGACCAGGTATGGGCTGCTTATGATGATGATGACGGAATGCCTCGTTATTATGCTCGGATTCACAAGGTGATATCCATGGAGCCATTTAGAATGCGAATCAGCTGGCTTAACTCTAGAAGCAACAGTGAATTGGGTCCCATAGATTGGATAGGTGCTGGATTTACTAAAACTTGTGGGGACTTTAGGACTGGCAGGCATGAAATCACTGAGTCATTAAATTCATTCTCACACATGGTTAGGTGGACAAAAGGCAACAGAGGAGTCATTCGTATCTTTCCGCTGAAAGGGCAAGTCTGGGCTCTTTATAAGGACTGGTCTCCCGATTGGAATGAACAGACTCCAGATGAAGTGATACACAAATATGATATGGTGGAGGTGCTTGAAGATTTTGACGAGGAGCTCGGGATATTAGTTGCGCCGTTGATTAAGCTTCGGGATTTCAGGACTGTGTTTAGAAGGCATGCTGACCCTGATCGGGTGACGAGGATTCCTAAAGGGGAGATGTTTCGCTTTTCTCACCAGGTTCCTAATTACATGCTTACAGGCGAAGAAGCTAATAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCAGCAGCTACACCTTTAGACCTTCTTCAAGCCACTATGGAATCTAATGAGGGATTGGGTGCTAAAAGGCTTGATGAAGACGCTTTGCCCAATTCAACTGAAACGGAGAAAGCTTCAGATACAAGAGGAGCGGATCAGTTGAACGAGATTTTTACATAG 2319 0.4252 MMDCNKDEAVRAKEIAEKKFSDREYAGAKKFALKALNLYPALDGLSQFLTNLDVYISAENKVSGEMDWYGILGVNPFDDEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNLKRSLKGFQHKTPNHAGSQSEVPGSNGFYNLNKNVTSNVRAGNSNSQARHGSAPRPQKKADTFWTICNRCRTHYEYLRVYLNHRLLCPNCNEAFLAIEKEPPPNYFKSANWSSRQQHQSSRHHASSNNQANAGKNFTVSQNSEAIGTSGMSSYGKASYQWGPHSSMAGFGGMDGSSSVAAQAASVVQQASEKVRREREGAPSIAEWERSQMSKRTDGSFHKGEKSWKKRRTDDIGMNGIKGYMANHMTAGQGAAGMGYASDLRKANWETERSYGFSGMKPNSTRELSLFEIRNMLVDKAQSEIRKKLEEWKLVAQSKITSKSKENKKQKSTLTAKTSDSKKHKDSILDNSCHVEGDSFPVTSDNTVKEDQSYIIMNVPDPDFHNFDVDRTENAFAEDQVWAAYDDDDGMPRYYARIHKVISMEPFRMRISWLNSRSNSELGPIDWIGAGFTKTCGDFRTGRHEITESLNSFSHMVRWTKGNRGVIRIFPLKGQVWALYKDWSPDWNEQTPDEVIHKYDMVEVLEDFDEELGILVAPLIKLRDFRTVFRRHADPDRVTRIPKGEMFRFSHQVPNYMLTGEEANNAPKGCRELDPAATPLDLLQATMESNEGLGAKRLDEDALPNSTETEKASDTRGADQLNEIFT 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00010 772 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pral3968g00010 772 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pral3968g00010 772 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pral3968g00010 772 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pral3968g00010 772 PANTHER BNAC03G44070D PROTEIN 2 725 - -
Pral3968g00010 772 MobiDBLite consensus disorder prediction 138 186 - -
Pral3968g00010 772 MobiDBLite consensus disorder prediction 740 763 - -
Pral3968g00010 772 MobiDBLite consensus disorder prediction 445 474 - -
Pral3968g00010 772 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Pral3968g00010 772 MobiDBLite consensus disorder prediction 448 474 - -
Pral3968g00010 772 MobiDBLite consensus disorder prediction 740 772 - -
Pral3968g00010 772 SMART dnaj_3 66 123 IPR001623 -
Pral3968g00010 772 CDD DnaJ 67 120 IPR001623 -
Pral3968g00010 772 Gene3D DnaJ domain 64 177 IPR036869 -
Pral3968g00010 772 SUPERFAMILY Chaperone J-domain 59 127 IPR036869 -
Pral3968g00010 772 MobiDBLite consensus disorder prediction 336 356 - -
Pral3968g00010 772 Pfam Domain of unknown function (DUF3444) 502 708 IPR024593 -
Pral3968g00010 772 MobiDBLite consensus disorder prediction 139 180 - -
Pral3968g00010 772 MobiDBLite consensus disorder prediction 234 262 - -
Pral3968g00010 772 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00010 Pral-Chr3968 26042 31579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00010 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 7.78e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00010 - - cam:101501612 1058.51