Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00007 ATGTTTAAAGTGGCTTGCACAGTTGAAGATGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGAGGAAAAAGGGTGACCATGGAGGATTTTTATGATATTAAGATATCTAATATTGATGGACGTTCGGTATGCTTGTTCGGAATATTTGACGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGAGCATCTCTTCAATAACCTCATGAAGCATCCAAAATTTTTGACTGATACTAAATTGGCTATAAGTGAAACTTATCAACAGACTGATGCTGATTTTCTGGATTCTGAAAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACTGCAGTTTTGGTTGATAACCATCTTTATGTTGCCAATGTTGGAGATTCTAGGACCATAATATCCAAAGCTGGTAAAGCCATAGCTCTCTCTGAGGATCATAAGCCAAATAGAACTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTATAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTTTGTTGTGGCAGAACCAGAGATCCAGGAACAGGTAATAGATGAAGAGCTGGAGTTGCTGTTACTTGCAAGTGATGGGCTATGGGATGTGGTACCAAATGACGACGCTGCTTCTCTTGCCCGTGCTGAAGATGAACCGGAAGCAGCTGCTCGTAGGCTAACTGAAGCCGCTTTTAGTCGGGGTAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGATAAAACAAACCCAGCTAATTCTGAGGAAGCGGGTCCAGGATCCAGCTAG 837 0.4385 MFKVACTVEDGRLSCGYSSFRGKRVTMEDFYDIKISNIDGRSVCLFGIFDGHGGSRAAEYLKEHLFNNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRTDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQEQVIDEELELLLLASDGLWDVVPNDDAASLARAEDEPEAAARRLTEAAFSRGSADNITCIVVRFHHDKTNPANSEEAGPGSS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00007 278 Gene3D - 3 275 IPR036457 -
Pral3968g00007 278 FunFam Probable protein phosphatase 2C 76 6 266 - -
Pral3968g00007 278 Pfam Protein phosphatase 2C 16 253 IPR001932 -
Pral3968g00007 278 SUPERFAMILY PP2C-like 11 261 IPR036457 -
Pral3968g00007 278 ProSiteProfiles PPM-type phosphatase domain profile. 14 260 IPR001932 -
Pral3968g00007 278 CDD PP2Cc 14 260 IPR001932 -
Pral3968g00007 278 SMART PP2C_SIG_2 12 260 IPR001932 -
Pral3968g00007 278 SMART PP2C_4 4 258 IPR001932 -
Pral3968g00007 278 ProSitePatterns PPM-type phosphatase domain signature. 45 53 IPR000222 GO:0043169
Pral3968g00007 278 PANTHER PROTEIN PHOSPHATASE 15 260 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00007 Pral-Chr3968 18346 23395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00007 9 265 PP2C-type Phosphatase Gene Family AT5G53140 83.658 1.22e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00007 K17506 - gmx:100805795 449.899