Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00006 ATGATGACGGTGGGTTTGCCAGCGGAGGGTGGAAAAGATGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGAGGAAAAAGGGTGACCATGGAGGATTTTTATGATATTAAGATATCTAATATTGATGGACGTTCGGTATGCTTGTTCGGAATATTTGACGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGAGCATCTCTTCAATAACCTCATGAAGCATCCAAAATTTTTGACTGATACTAAATTGGCTATAAGTGAAACTTATCAACAGACTGATGCTGATTTTCTGGATTCTGAAAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACTGCAGTTTTGGTTGATAACCATCTTTATGTTGCCAATGTTGGAGATTCTAGGACCATAATATCCAAAGCTGGTAAAGCCATAGCTCTCTCTGAGGATCATAAGCCAAATAGAACTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTATAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTTTGTTGTGGCAGAACCAGAGATCCAGGAACAGGTAATAGATGAAGAGCTGGAGTTGCTGTTACTTGCAAGTGATGGGCTATGGGATGTGGTACCAAATGACGACGCTGCTTCTCTTGCCCGTGCTGAAGATGAACCGGAAGCAGCTGCTCGTAGGCTAACTGAAGCCGCTTTTAGTCGGGGTAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGATAAAACAAACCCAGCTAATTCTGAGGAAGCGGGTCCAGGATCCAGCTAG 846 0.4456 MMTVGLPAEGGKDGRLSCGYSSFRGKRVTMEDFYDIKISNIDGRSVCLFGIFDGHGGSRAAEYLKEHLFNNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRTDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQEQVIDEELELLLLASDGLWDVVPNDDAASLARAEDEPEAAARRLTEAAFSRGSADNITCIVVRFHHDKTNPANSEEAGPGSS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00006 281 CDD PP2Cc 17 263 IPR001932 -
Pral3968g00006 281 SMART PP2C_SIG_2 15 263 IPR001932 -
Pral3968g00006 281 ProSitePatterns PPM-type phosphatase domain signature. 48 56 IPR000222 GO:0043169
Pral3968g00006 281 ProSiteProfiles PPM-type phosphatase domain profile. 17 263 IPR001932 -
Pral3968g00006 281 PANTHER PROTEIN PHOSPHATASE 17 263 IPR015655 GO:0004722|GO:0006470
Pral3968g00006 281 FunFam Probable protein phosphatase 2C 76 10 269 - -
Pral3968g00006 281 Pfam Protein phosphatase 2C 19 256 IPR001932 -
Pral3968g00006 281 SUPERFAMILY PP2C-like 15 264 IPR036457 -
Pral3968g00006 281 SMART PP2C_4 7 261 IPR001932 -
Pral3968g00006 281 Gene3D - 10 278 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00006 Pral-Chr3968 18346 23395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00006 13 268 PP2C-type Phosphatase Gene Family AT5G53140 83.984 2.27e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00006 K17506 - gmx:100805795 449.129