Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00005 ATGTCAAACCCGGGACCCATTGTTGATATGTTGGCAGAGAAAGATGATGACGGTGGGTTTGCCAGCGGAGGGTGGAAAAGTGAAGATGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGAGGAAAAAGGGTGACCATGGAGGATTTTTATGATATTAAGATATCTAATATTGATGGACGTTCGGTATGCTTGTTCGGAATATTTGACGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGAGCATCTCTTCAATAACCTCATGAAGCATCCAAAATTTTTGACTGATACTAAATTGGCTATAAGTGAAACTTATCAACAGACTGATGCTGATTTTCTGGATTCTGAAAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACTGCAGTTTTGGTTGATAACCATCTTTATGTTGCCAATGTTGGAGATTCTAGGACCATAATATCCAAAGCTGGTAAAGCCATAGCTCTCTCTGAGGATCATAAGCCAAATAGAACTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTATAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTTTGTTGTGGCAGAACCAGAGATCCAGGAACAGGTAATAGATGAAGAGCTGGAGTTGCTGTTACTTGCAAGTGATGGGCTATGGGATGTGGTACCAAATGACGACGCTGCTTCTCTTGCCCGTGCTGAAGATGAACCGGAAGCAGCTGCTCGTAGGCTAACTGAAGCCGCTTTTAGTCGGGGTAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGATAAAACAAACCCAGCTAATTCTGAGGAAGCGGGTCCAGGATCCAGCTAG 894 0.4463 MSNPGPIVDMLAEKDDDGGFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKISNIDGRSVCLFGIFDGHGGSRAAEYLKEHLFNNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRTDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQEQVIDEELELLLLASDGLWDVVPNDDAASLARAEDEPEAAARRLTEAAFSRGSADNITCIVVRFHHDKTNPANSEEAGPGSS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00005 297 ProSitePatterns PPM-type phosphatase domain signature. 64 72 IPR000222 GO:0043169
Pral3968g00005 297 SMART PP2C_SIG_2 15 279 IPR001932 -
Pral3968g00005 297 PANTHER PROTEIN PHOSPHATASE 29 279 IPR015655 GO:0004722|GO:0006470
Pral3968g00005 297 CDD PP2Cc 33 279 IPR001932 -
Pral3968g00005 297 Pfam Protein phosphatase 2C 35 272 IPR001932 -
Pral3968g00005 297 ProSiteProfiles PPM-type phosphatase domain profile. 33 279 IPR001932 -
Pral3968g00005 297 Gene3D - 24 294 IPR036457 -
Pral3968g00005 297 SMART PP2C_4 23 277 IPR001932 -
Pral3968g00005 297 SUPERFAMILY PP2C-like 30 280 IPR036457 -
Pral3968g00005 297 FunFam Probable protein phosphatase 2C 76 25 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00005 Pral-Chr3968 18346 23395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00005 7 284 PP2C-type Phosphatase Gene Family AT5G53140 82.014 4.69e-175 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00005 K17506 - gmx:100805795 495.352