Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00004 ATGATGGTTAATACAGGTGTTATGTCAAACCCGGGACCCATTGTTGATATGTTGGCAGAGAAAGATGATGACGGTGGGTTTGCCAGCGGAGGGTGGAAAAGTGAAGATGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGAGGAAAAAGGGTGACCATGGAGGATTTTTATGATATTAAGATATCTAATATTGATGGACGTTCGGTATGCTTGTTCGGAATATTTGACGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGAGCATCTCTTCAATAACCTCATGAAGCATCCAAAATTTTTGACTGATACTAAATTGGCTATAAGTGAAACTTATCAACAGACTGATGCTGATTTTCTGGATTCTGAAAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACTGCAGTTTTGGTTGATAACCATCTTTATGTTGCCAATGTTGGAGATTCTAGGACCATAATATCCAAAGCTGGTAAAGCCATAGCTCTCTCTGAGGATCATAAGCCAAATAGAACTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTATAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTTTGTTGTGGCAGAACCAGAGATCCAGGAACAGGTAATAGATGAAGAGCTGGAGTTGCTGTTACTTGCAAGTGATGGGCTATGGGATGTGGTACCAAATGACGACGCTGCTTCTCTTGCCCGTGCTGAAGATGAACCGGAAGCAGCTGCTCGTAGGCTAACTGAAGCCGCTTTTAGTCGGGGTAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGATAAAACAAACCCAGCTAATTCTGAGGAAGCGGGTCCAGGATCCAGCTAG 915 0.4437 MMVNTGVMSNPGPIVDMLAEKDDDGGFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKISNIDGRSVCLFGIFDGHGGSRAAEYLKEHLFNNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRTDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQEQVIDEELELLLLASDGLWDVVPNDDAASLARAEDEPEAAARRLTEAAFSRGSADNITCIVVRFHHDKTNPANSEEAGPGSS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00004 304 SUPERFAMILY PP2C-like 37 287 IPR036457 -
Pral3968g00004 304 SMART PP2C_SIG_2 22 286 IPR001932 -
Pral3968g00004 304 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Pral3968g00004 304 PANTHER PROTEIN PHOSPHATASE 35 286 IPR015655 GO:0004722|GO:0006470
Pral3968g00004 304 CDD PP2Cc 40 286 IPR001932 -
Pral3968g00004 304 Gene3D - 31 301 IPR036457 -
Pral3968g00004 304 SMART PP2C_4 30 284 IPR001932 -
Pral3968g00004 304 FunFam Probable protein phosphatase 2C 76 32 292 - -
Pral3968g00004 304 Pfam Protein phosphatase 2C 42 279 IPR001932 -
Pral3968g00004 304 ProSiteProfiles PPM-type phosphatase domain profile. 40 286 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00004 Pral-Chr3968 18346 23395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00004 1 291 PP2C-type Phosphatase Gene Family AT5G53140 79.725 1.19e-176 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00004 K17506 - gmx:100805795 504.597