Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3968g00003 ATGGTTTACAGCAGTTGTATAAGGTCTTTGGTTGTTCAAGTTCGATCCTTCACCAATAAAGTGCAATTCTACAACATTGTGAGAAGTTTGCATAAAGTTCCCTCCATTACTTATTCGTGGAATCGTGGATTTAAGACAAGCATAGGGATGATGGTTAATACAGGTGTTATGTCAAACCCGGGACCCATTGTTGATATGTTGGCAGAGAAAGATGATGACGGTGGGTTTGCCAGCGGAGGGTGGAAAAGTGAAGATGGAAGACTTAGCTGTGGGTATTCAAGTTTTAGAGGAAAAAGGGTGACCATGGAGGATTTTTATGATATTAAGATATCTAATATTGATGGACGTTCGGTATGCTTGTTCGGAATATTTGACGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGAGCATCTCTTCAATAACCTCATGAAGCATCCAAAATTTTTGACTGATACTAAATTGGCTATAAGTGAAACTTATCAACAGACTGATGCTGATTTTCTGGATTCTGAAAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACTGCAGTTTTGGTTGATAACCATCTTTATGTTGCCAATGTTGGAGATTCTAGGACCATAATATCCAAAGCTGGTAAAGCCATAGCTCTCTCTGAGGATCATAAGCCAAATAGAACTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTATAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTTTGTTGTGGCAGAACCAGAGATCCAGGAACAGGTAATAGATGAAGAGCTGGAGTTGCTGTTACTTGCAAGTGATGGGCTATGGGATGTGGTACCAAATGACGACGCTGCTTCTCTTGCCCGTGCTGAAGATGAACCGGAAGCAGCTGCTCGTAGGCTAACTGAAGCCGCTTTTAGTCGGGGTAGTGCAGATAACATTACATGCATTGTGGTGCGCTTCCATCATGATAAAACAAACCCAGCTAATTCTGAGGAAGCGGGTCCAGGATCCAGCTAG 1062 0.435 MVYSSCIRSLVVQVRSFTNKVQFYNIVRSLHKVPSITYSWNRGFKTSIGMMVNTGVMSNPGPIVDMLAEKDDDGGFASGGWKSEDGRLSCGYSSFRGKRVTMEDFYDIKISNIDGRSVCLFGIFDGHGGSRAAEYLKEHLFNNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRTDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQEQVIDEELELLLLASDGLWDVVPNDDAASLARAEDEPEAAARRLTEAAFSRGSADNITCIVVRFHHDKTNPANSEEAGPGSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3968g00003 353 CDD PP2Cc 89 335 IPR001932 -
Pral3968g00003 353 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Pral3968g00003 353 ProSiteProfiles PPM-type phosphatase domain profile. 89 335 IPR001932 -
Pral3968g00003 353 FunFam Probable protein phosphatase 2C 76 81 341 - -
Pral3968g00003 353 Gene3D - 80 350 IPR036457 -
Pral3968g00003 353 PANTHER PROTEIN PHOSPHATASE 78 335 IPR015655 GO:0004722|GO:0006470
Pral3968g00003 353 SMART PP2C_SIG_2 71 335 IPR001932 -
Pral3968g00003 353 SUPERFAMILY PP2C-like 86 336 IPR036457 -
Pral3968g00003 353 Pfam Protein phosphatase 2C 91 328 IPR001932 -
Pral3968g00003 353 SMART PP2C_4 79 333 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3968g00003 Pral-Chr3968 18344 23395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3968g00003 1 340 PP2C-type Phosphatase Gene Family AT5G53140 71.023 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3968g00003 K17506 - qsa:O6P43_015030 541.576