Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3967g00013 ATGAAGCAGCAAAAACGTCACCCGCCGTCGCCCACGGCGGGCCTCCGGCGATTAAACACTGATCGCAAAGATATGTGCGCTGACACTCTTACAAAATTAAAGAATGCTCGGCTTAGAAGACTTAAAATCCAGCGATTGAAGTTGAAGTATACTTGTGAAGCGAAGATCCGTGTCGCCCCCGAAGATCGTGGGGAGGGGACCAAGTGTGGGGAGCCGGAAAGTGAAGATAGAAAGATTCATGAATCGATGCAGATATCATTGTCGTTAACGACGTCGTCGAAGGAGGAGGATCGGTCGAGTCTGGCGGGGAACAACGGCGTTCTGGATGATTTCAGAGTCGAGAAATACAAAGAAGAACGCTACGGTGTGGAGGACTTATCTTACGGTTCGGTGTCCTTGATAGGTAATAGAAAAGAGATGGAAGATGCGGTGAGCATAGAGGTGGGGTTTGTGGTGAAGGAGAGCACCAAGTGTGACTTCTTTGCAGTTTATGACGGCCACGGTGGAGCCCAGGTGGCGAAAGCGTGCCGAGCGCGACTGTACCAATTGGTGGCGGAGGAGTTGGAAAGGCAGGGGAGAAATGGTGGCAAAGTGGATTGGGAGGGAATGATGGCGGGGTGTTTTAGTAAAATGGATAGCGAACTAGCAGACAATGCGGCGGCGCGGACTGTGGGATCCACGGCGGTTCTGGCCGTAGTGGCAAAGGATGAGGTGGTCGTGGCCAATTGCGGCGACTGTAGGGCGGTGATGGGAAGAGCTGGTGAGGCTTTCGCCTTGTCTGATGATCATAAGCCTGACAGGCCTGATGAGCTGATGCGAATAGAAGCGGCTGGTGGAAGGGTCATAAACTGGAACGGCCAACGAGTTCTAGGAGTTCTTGCTACCTCCAGATCTATTGGAGACCAATACCTTCGACCTTACGTGATATCGAAACCAGAAGTGACTGTGACAAAGCGAACTAACAAGGATGAGTTCCTTATACTGGCCAGTGATGGTTTGTGGGACGTAATCTCCGGTGAAGCTGCGTGTGAGGTTGTAAGGAAGTGTCTTAGTGGCCAAGCGAGACGGAACTCGCCGGAGCTTGAAAACCACCAGAGTCTGGCCAGTGAGGCTGCAGCCCTATTGGCTGAGCTAGCAATGGCAAAAGGAAGCAGAGATAACACAAGTGTGATCGTAGTTGAGCTCAGGAAGCAAAATAATGGACATCGATCTCGTTGA 1218 0.5164 MKQQKRHPPSPTAGLRRLNTDRKDMCADTLTKLKNARLRRLKIQRLKLKYTCEAKIRVAPEDRGEGTKCGEPESEDRKIHESMQISLSLTTSSKEEDRSSLAGNNGVLDDFRVEKYKEERYGVEDLSYGSVSLIGNRKEMEDAVSIEVGFVVKESTKCDFFAVYDGHGGAQVAKACRARLYQLVAEELERQGRNGGKVDWEGMMAGCFSKMDSELADNAAARTVGSTAVLAVVAKDEVVVANCGDCRAVMGRAGEAFALSDDHKPDRPDELMRIEAAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTNKDEFLILASDGLWDVISGEAACEVVRKCLSGQARRNSPELENHQSLASEAAALLAELAMAKGSRDNTSVIVVELRKQNNGHRSR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3967g00013 405 MobiDBLite consensus disorder prediction 1 21 - -
Pral3967g00013 405 FunFam Protein phosphatase 2C 51 122 403 - -
Pral3967g00013 405 CDD PP2Cc 127 395 IPR001932 -
Pral3967g00013 405 ProSiteProfiles PPM-type phosphatase domain profile. 127 395 IPR001932 -
Pral3967g00013 405 ProSitePatterns PPM-type phosphatase domain signature. 160 168 IPR000222 GO:0043169
Pral3967g00013 405 MobiDBLite consensus disorder prediction 61 81 - -
Pral3967g00013 405 SMART PP2C_4 117 393 IPR001932 -
Pral3967g00013 405 PANTHER PROTEIN PHOSPHATASE 92 395 IPR015655 GO:0004722|GO:0006470
Pral3967g00013 405 SUPERFAMILY PP2C-like 109 396 IPR036457 -
Pral3967g00013 405 Gene3D - 124 403 IPR036457 -
Pral3967g00013 405 Pfam Protein phosphatase 2C 128 388 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3967g00013 Pral-Chr3967 132047 135162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3967g00013 128 402 PP2C-type Phosphatase Gene Family AT1G07430 45.062 3.19e-88 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3967g00013 K14497 - gmx:100807235 447.588