Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3965g00107 ATGGACGAAAGACTGTCCAGTAAGAAACACCACCTCCACAGCGAGCGTGACATGGAAAGTTCTTCTGGTGATACTAGATTGTCGCAGGACGAAAGGGAGTGGAAACGACCCAAAGTTGAAGGAAATTCTGAAAATGGGCTTGTGGGTCCTGACCGGGATGGAGTTCAAGATAACGATGGTCTGAACGTCATTCAAGAAACTGCGGGCCCTTTTCGTGAGGGGCAAGGGGAGGGCATGAATCCTGACGTTGAAAGTATGGACATTGGGTATCCGACAGGGGGAGAACAAGTTCAGGCCGGCGGATTTGCGGCTCAAATTCTTCGCGATGGAGGAAAATTTCAAGCCGGGTACGGTGACGGTGGGAATCAAGATGACGTTCTCAGTCGTCAGGACGATGCTGATCAACCATGGAGCAGAGAACGTACTGTTGGAAATGGCTGTGGTGTCGCTGACGCTGGTCAAGAAGAGAGCGTGAGTAGGAGAGGAGCATATGTTTGTGAAAATGACGCTGTGGGCTTCCCTGCTGTGTACGATGATGGAAATTATGATAGTTTAAAGGAGCATGGGTCAAAAGACGAGTGTGGCCAGCCCAAAGTATCACAGGAAGAGAGAGTTCTCGTTGTTGAAGAGGGACGAGAGCTGTTAAATGCTGCTAGTGATGAGGAGGGAGGTGAAACCTTGGGCCAATGGTTGAAAAGATGTCAGTCGAAGAGTTCCAAGAATAAGAATAAACGGCTTACTTGGGGAGAAGCCATGAAATTGAATGAACAAACTGTTAATGAAGATGTAAGTGCGGATACATGTGGGAAAAAGAATGTGCTGCCTGTCGAGATCATTGCTAGTGACGTTGGTGCAGGCTATCTAATGAATCATTCTCAAGTAGAGAATTTGAAAAGTGGAAAGAAGCGTGGCAGACCAAGGGGCTCAAAAAATAAAATGAAGAGTAATTTGCGTGCTATTGATGTAGGCGCAGGTGACATTGAAATACCAAAGAGGCGTGGTAGACCTAAGGAATCTAGAAATGGATGGAAGATTATTTCGTGGCATAGGAATGCAAATTCAGTTGACGCTAAAGCACCAAAGAAGCGTGGCAGACCAAGGGGCTCAAAAAATAAGATGAGGAGTGGTGCAAGTGATGTTGGTGTTGGTGACATTGAAGCGCCCAAGAAGCGAGGTCAACCTAAGGGGGCGAAAAATAAAAAGCGGAGTATTGTCTGTGTTAGTAATGCAGATGTGGATGACACTGGAACGCCGAAAAAAAGAGGTCGACCTAAGGGTTCAAAAAATAAAAAGGGGGCGAGTGTATCTGTTAGTAATGATGGTGCAATTGACATTGAAATTCCCAAGAAGTGTGGTAGACCAAAAGGCTCAAAAAATAAAAAGCTGAGTATTGCCTGTGCTAGCAATGCAAGTGCAGGCGACATTGAAAACCCAATGAAGTCTACAGTGAAGTATGGTCAGCCATGGAACTCAAGAAACAAGAAGAAAAAATTGGGAGATCAGATAAATGAAGAAATGTGTGGTGAAGTTATGTTTGTCCACAAGGCATGTGATAAAACTATCGGTGTTGCATGTTTGGAAAATAATTTAGCCAATATTGCAGATGAGCAACATATAGGTTCACTTGTTCAAACTGCTGATAATAGAAAAAGTCGAGAAGAGGATCTAAAGCAAAAGATGAGTGTTCAACCACAAAGAACTACCCATGTCAGCGATGGGAATAAGGATATGCCTTCAAAGGGCTCTAGTGATGGTGAGGTTCTAAACGAGAATAGCCATGTTAAAACAAAGCATGATCAACCAAAGGGTAATATTGAAAGAAAAGAGCATTTGACTAGAAAATTTCCTGGAGGATCTAATGAGGAAATGGTGAACATTTGCTTGGCTAGACCAGGGAATGAGATCATTACTGCTGAAGTTGAGGCAGATAAGGAATTTTCTATTGGTAGATCTAGTGATTATGGATCTGAAAACAATATTGATAAGGCAAATAATACGTATGGCAGGCCAAAGAGCTTCAGAGACAGAGAAAAGGAGACTGTCGGGTCTCTTGATTCAAAGATTCAGAGGCATGACAATGTAGCTGAGATAGATGGAAGAACATCTGCTGAAGCTTGTAGAAATGATATTGATGGGCAAAAAGTTAAGCATAGAAAACAGAGTTTAAAAAGTAAGAAACTGTCCATTGAGCGCTACCAATTGAAGGGTTCAAGAGGAAAGGTGCCAACTATTGCTGCTGATGAAGATGAGAGTGAATCAGTTGGACTGAAGCACAAATCCAGGAGGAATGAGAGATCAAATAATAAGAGAGCCCGATCCTTACAAAGTAAGAAGAGGATTCTTTCAGGTAGAGTGGTCAGATACTCAAGAGAGCCAGGAAAAAAGATGAAAACAAAACGGTTAGAATGTGGATCTGGCAGCATCCAGACAAGGTCTAGCGGAAGGCTGAGAAAATTGTCAAACCATAAAGCAGAATCTTCAGGCAGCAGCTTTCAGAGTAGGCGTAGTGGAAGGCTGAGAAAGTTGTCAAGCAGTGGATTAGACTCTTCAGGGTTGAACGTTGATTCCAGAAGGAAGAAGGGCCTGTGGAGTTTAATGTGCCACCAGTGCTGGAGGAGCGATAGGAGTGGTGTTGTCATTTGTGGCAACTGCAAACAGAAGCGATATTGCTATGAGTGCATAACAAAATGGTATCCAAACAAAACAAGAGAGGAGATGGAGCTTTCCTGTCCCTTTTGCCTTGGTAATTGCAATTGTCGGTTGTGTTTGAAAGAGGCTGTATCTGCAGAGACCGCAAGTGTTGAACCTGATACTGACATCAATTTGCAAAAGTTGCTTTACTTGCTCAAGAACATTCTGCCTTTACTCCAGCGTATCCAACAAGAGCAGAGATCAGAAATGGAAATAGAATCTAGCTTGCATGGTTCACTACTGACAGAAGAAAATATCATGCAGTCACAGATTGATGATGATGATCGAGTGTATTGTGACAACTGTAATACATCCATCGTCAACATGCACAGAAGTTGTCCTAATCCTAGTTGTAGTTATGATCTCTGCCTCATTTGTTGCATAGAACTAAGAAATGGACTTCATTGTGGAGATATTTCCACTAACAGCAATGATGGAGGGGCTGATACCTCATCTGAACTTTATTGGAAAGCAAATATAAATAGTTTGGTTCCTTGCCCGCCAAAATCAAGGGGAGGCTGTGGCGCTACAATTCTCTCATTGAGACGCCTTTTTAAAGCTAACTGGGTGGATGAATTGATCGGGAATGCCGAGGAACTTACAAGCAAATACAAGCCCCCTAATGCTGATTCAACTGAAGGTTGTTTATTGTGCCATAACTTTAGGATTGATACAGTACAGGATTTTGAAAGGCAGGCGGCTTCCCGAGAAAACTGTCATGATAATTTTTTGTTCTGCCCAAATGCTATGCACATGGGAGATAAAGAATTCAAGCATTTTCAGATGCATTGGGTGAGAGGTGAGCCTGTTATAGTTAGGAATGCTTTTGAAAAGGCTAGGGGCCTTAGCTGGGATCCAATGGTGATGTGGAGGGCTTTTAGAGGGGCAAAGAGGATACTAAAAGAGGAGGCAACTGTGGTCAAAGCCATTGACTGCTTAGATTGGTGCGAGGTTGAAATTAATATCTTCCAGTTCTTCAAGGGCTACCTTGAAGGTCGTAGGTATAGAAATGGGTGGCCCGAGATGTTGAAGCTAAAGGATTGGCCTCCATCAAATGCCTTCGAAGAGTGTTTGCCTAGGCATGGTGCTGAGTTTATAGCTATGCTTCCATTTAGTGACTATACTCATCCCACATCTGGTATTCTAAATCTTACTACAAAGCTACCTGCCGTTTTAAAGCCAGATTTGGGCCCCAAAACATACATTGCATATGGATCTTTGGAAGAGCTCGGTAGAGGTGATTCTGTAGCAAAACTACATTGTGACGTATCAGATGCGGTCAATATATTGACACATACAGCTGAAGTAAAAAGACCACCACAGCAAAGAAAAGCCATAATCAAATTACAGAAAAAGCATGAAGCTGAAGATATGTGTGCACTCTATGACAGGAAGAATGAAGGATTGACTTCTTGTAGGAAAAAGCCAAAACGGCGCTGCCTGGATACGAACAAGGGTTCTAAAAGCCCTAGAAAAGAAGACACTATCGTGGGAGACTATACTGTACTTAAAAGCCAGGTATCAGAGGAAGAGAATATGAATGAACAGCGGAATGGTTCTGGAGATTTGGGACCCTCAAGAGCATATACTGCAGCTTGCGCTCTAAAACGTGCAGCTTCTCCCAAACTTGAAAAAGAAGACTCTGAACGGACGCATGGTGAAGTTAAGAATGCTGTCCAAAAAAGCTCGTTATCACATGATGGACATCATGAAGGAATTTCATCCCCTGACCATATTCTGTCTGGAACATCCACAAAAGACAGTCATGAAAAAGAAAAAACTTATGCCTGGGTAAATCAGGTCAATTCAACAAATTTTACAGAACAATCTGAATCAAAAGGCACGTGCATGTGTGCTGAGGAGTCTCCTAATGGAATCATTCCCAACGTTGAGCATGATTGTGACAGTTCCTGTGCTGAGGGGACTAACACGGGTCGTGACTCCATGCTGCACAAGTCTTGTGAACAAGGGGCATGTTCTGAAATCAAGAATCACAAAATTGAGTCACTTAGAAATGATACGAGAACAGCAAAAGCTTTCCTTGAAAATGATGATGCGTTAGAGACCCAATACGGGAGTGCTGTATGGGACATATTTCGCAGGCAAGATGTGCCGGTGCTGATGGAGTACCTGAAAAAACACTACAGAGAATTCCGCCACATAAATAATCTTCCTGTGAATTCTATAATACATCCAATTCATGACCAGACTCTTTATCTAAACGAAAGACATAAAAAGCAGCTAAAGGAAGAATTTGGCATTGAACCATGGACATTTGAGCAACACCTTGGCGAGGCTGTTTTCATACCTGCAGGGTGCCCGCATCAAGTGAGGAATAGACAGTCTTGCATAAAAGTGGCTCTAGACTTTGTTTCACCTGAAAATGTTCAAGAGTGTGTTCGATTGACGGAGGAATTTCGGCTGCTTCCGAAGAAACATAGATCGAAGGAAGATATACTGGAGATAAAGAAGATGGCACTGTATGCTGCCAACGCTGCTATAACTGAAGCCATGAGATTAATGCGGAGGATATGA 5226 0.4288 MDERLSSKKHHLHSERDMESSSGDTRLSQDEREWKRPKVEGNSENGLVGPDRDGVQDNDGLNVIQETAGPFREGQGEGMNPDVESMDIGYPTGGEQVQAGGFAAQILRDGGKFQAGYGDGGNQDDVLSRQDDADQPWSRERTVGNGCGVADAGQEESVSRRGAYVCENDAVGFPAVYDDGNYDSLKEHGSKDECGQPKVSQEERVLVVEEGRELLNAASDEEGGETLGQWLKRCQSKSSKNKNKRLTWGEAMKLNEQTVNEDVSADTCGKKNVLPVEIIASDVGAGYLMNHSQVENLKSGKKRGRPRGSKNKMKSNLRAIDVGAGDIEIPKRRGRPKESRNGWKIISWHRNANSVDAKAPKKRGRPRGSKNKMRSGASDVGVGDIEAPKKRGQPKGAKNKKRSIVCVSNADVDDTGTPKKRGRPKGSKNKKGASVSVSNDGAIDIEIPKKCGRPKGSKNKKLSIACASNASAGDIENPMKSTVKYGQPWNSRNKKKKLGDQINEEMCGEVMFVHKACDKTIGVACLENNLANIADEQHIGSLVQTADNRKSREEDLKQKMSVQPQRTTHVSDGNKDMPSKGSSDGEVLNENSHVKTKHDQPKGNIERKEHLTRKFPGGSNEEMVNICLARPGNEIITAEVEADKEFSIGRSSDYGSENNIDKANNTYGRPKSFRDREKETVGSLDSKIQRHDNVAEIDGRTSAEACRNDIDGQKVKHRKQSLKSKKLSIERYQLKGSRGKVPTIAADEDESESVGLKHKSRRNERSNNKRARSLQSKKRILSGRVVRYSREPGKKMKTKRLECGSGSIQTRSSGRLRKLSNHKAESSGSSFQSRRSGRLRKLSSSGLDSSGLNVDSRRKKGLWSLMCHQCWRSDRSGVVICGNCKQKRYCYECITKWYPNKTREEMELSCPFCLGNCNCRLCLKEAVSAETASVEPDTDINLQKLLYLLKNILPLLQRIQQEQRSEMEIESSLHGSLLTEENIMQSQIDDDDRVYCDNCNTSIVNMHRSCPNPSCSYDLCLICCIELRNGLHCGDISTNSNDGGADTSSELYWKANINSLVPCPPKSRGGCGATILSLRRLFKANWVDELIGNAEELTSKYKPPNADSTEGCLLCHNFRIDTVQDFERQAASRENCHDNFLFCPNAMHMGDKEFKHFQMHWVRGEPVIVRNAFEKARGLSWDPMVMWRAFRGAKRILKEEATVVKAIDCLDWCEVEINIFQFFKGYLEGRRYRNGWPEMLKLKDWPPSNAFEECLPRHGAEFIAMLPFSDYTHPTSGILNLTTKLPAVLKPDLGPKTYIAYGSLEELGRGDSVAKLHCDVSDAVNILTHTAEVKRPPQQRKAIIKLQKKHEAEDMCALYDRKNEGLTSCRKKPKRRCLDTNKGSKSPRKEDTIVGDYTVLKSQVSEEENMNEQRNGSGDLGPSRAYTAACALKRAASPKLEKEDSERTHGEVKNAVQKSSLSHDGHHEGISSPDHILSGTSTKDSHEKEKTYAWVNQVNSTNFTEQSESKGTCMCAEESPNGIIPNVEHDCDSSCAEGTNTGRDSMLHKSCEQGACSEIKNHKIESLRNDTRTAKAFLENDDALETQYGSAVWDIFRRQDVPVLMEYLKKHYREFRHINNLPVNSIIHPIHDQTLYLNERHKKQLKEEFGIEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVQECVRLTEEFRLLPKKHRSKEDILEIKKMALYAANAAITEAMRLMRRI 1741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3965g00107 1741 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 557 1737 IPR045109 GO:0032454|GO:0033169
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 823 852 - -
Pral3965g00107 1741 SUPERFAMILY Clavaminate synthase-like 1151 1724 - -
Pral3965g00107 1741 SMART AT_hook_2 448 460 IPR017956 GO:0003677
Pral3965g00107 1741 SMART AT_hook_2 388 400 IPR017956 GO:0003677
Pral3965g00107 1741 SMART AT_hook_2 360 372 IPR017956 GO:0003677
Pral3965g00107 1741 SMART AT_hook_2 330 342 IPR017956 GO:0003677
Pral3965g00107 1741 SMART AT_hook_2 418 430 IPR017956 GO:0003677
Pral3965g00107 1741 SMART AT_hook_2 300 312 IPR017956 GO:0003677
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 561 589 - -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 1436 1453 - -
Pral3965g00107 1741 FunFam Transcription factor jumonji (JmjC) domain-containing protein 1526 1713 - -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 784 801 - -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 651 666 - -
Pral3965g00107 1741 ProSiteProfiles JmjC domain profile. 1274 1704 IPR003347 -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 546 617 - -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 1404 1420 - -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 114 154 - -
Pral3965g00107 1741 Pfam JmjC domain, hydroxylase 1588 1687 IPR003347 -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 734 852 - -
Pral3965g00107 1741 SMART cupin_9 1255 1704 IPR003347 -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 742 771 - -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 1 96 - -
Pral3965g00107 1741 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 865 934 IPR018866 -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 590 616 - -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 325 344 - -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 294 437 - -
Pral3965g00107 1741 ProSiteProfiles Zinc finger RING-type profile. 867 913 IPR001841 -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 1404 1423 - -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 649 680 - -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 1435 1485 - -
Pral3965g00107 1741 Gene3D Cupin 1136 1410 - -
Pral3965g00107 1741 Gene3D Cupin 1539 1713 - -
Pral3965g00107 1741 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3965g00107 Pral-Chr3965 520339 530699 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pral3965g00107 JmjC 3.4e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3965g00107 K15601 - gsj:114384813 1323.53