Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3965g00096 ATGGGGAAGAAGGGTGGAGGTGGTTGGTTCTCGTCGGTAAAGAAAGCTTTCAAGTCTTCTTCTAAGGGCTCGCCGGTGCCAGAGAGGAAGAAGGAAGATGAAGTGAAATGGCAACATGAAGCACCCGAGGTTGTGTTGTTTGAGCATTTTCCTGCAGAGAGTTCTCCTGATGATATTACCAATGAGGAGAGCACCACGTCGACGCCTGTGACTGAAGATGGACGACGTGCTGTTGCTGCAGCAACTGCCGCAGCTGCCGAGGCAGCAGTTGCAGCCGCCCAAGCAGCGGCGAGAGTTGTTCAGATGGCAGGTTATGGACGCCAATCTGAGGAAGATATAGCAGCAACAATCATTCAATCATACTACAGAGGCTACCTAGCTCGACGTGCACGGCGTGCTTTGAAGGGATTGGTGAGACTGCAAGCGCTTGTGAGAGGTCACAATGTGAGGAAGCAAGCGCAAATGACAATGCGTTGTATGCAAGCGTTGGTGAGAGTGCAGGCCAAAGTTAGAGCTCGCAGGCTCCAGCTGACTCATGACAAGCTTTACAAGAATGTGATGGAACATGATTTAGCGCCCATGAGTCCCTTGTACAGGGATGGTTGGGACAATAGGCGTCACAGTTTCCAGAGAATCAATGAAAGTGACCTGTGGAAACATGAAGATGCATTGAAGAGGGAGAGAGCTCTTGCTGACGCTTATAATTATCAGCAACAGAACCGGTCACCGCATCCAGGCCTGAATCTTGGAGAAGAAATAGAAACATATTCCAGTGAACTTGAACAAGCCAAGCGGGGTTGGAACTGGTTAGAGCGTTGGATGTCCTCTCAACAAAATCAGGCCAGGCACTTGGGGCCGCCAGAGACCTCTTATTACATGACCCACGCTACTACAACCACCGCCACCACCGCTGATGACATGTCTGAGAAGACGGTGGAAATGGACATTGGGAGCACCACCATCAGGGGCCAAGGCCTTCTTCTGGACTCAAGCCCAATTCCCAATAGGCGGTCCAATGACATACAACCCCAGCCCAACACAGGCGTACCTAGCTATATGGCCCCAACCCAGTCTGCAAAGGCCAAGCTAAGGCTTGGTCCCGGCCCAGTCAAGCCACGTGGCTCTCCTGTGCCAGCGTGGAATTCTTCAACAAGGAAGAGCTACGTCATGGGGTCGGGCTGCGACTCCTCCAGCTCAGGGGGAGGAACGGCAAACTACCTGTTTATGAGGAGCCCAGGCCCGAAAATTGGCGGGGCTCCTCTGCAGACTAGACGGATTGCGGGAGGAAGCTCAGAATTTGTGGGTAGTGAGGATTGGACACTGCCTCTGGGAGCCCATGCTTGGGCATGA 1350 0.5281 MGKKGGGGWFSSVKKAFKSSSKGSPVPERKKEDEVKWQHEAPEVVLFEHFPAESSPDDITNEESTTSTPVTEDGRRAVAAATAAAAEAAVAAAQAAARVVQMAGYGRQSEEDIAATIIQSYYRGYLARRARRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQAKVRARRLQLTHDKLYKNVMEHDLAPMSPLYRDGWDNRRHSFQRINESDLWKHEDALKRERALADAYNYQQQNRSPHPGLNLGEEIETYSSELEQAKRGWNWLERWMSSQQNQARHLGPPETSYYMTHATTTTATTADDMSEKTVEMDIGSTTIRGQGLLLDSSPIPNRRSNDIQPQPNTGVPSYMAPTQSAKAKLRLGPGPVKPRGSPVPAWNSSTRKSYVMGSGCDSSSSGGGTANYLFMRSPGPKIGGAPLQTRRIAGGSSEFVGSEDWTLPLGAHAWA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3965g00096 449 MobiDBLite consensus disorder prediction 1 37 - -
Pral3965g00096 449 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Pral3965g00096 449 MobiDBLite consensus disorder prediction 57 72 - -
Pral3965g00096 449 MobiDBLite consensus disorder prediction 50 74 - -
Pral3965g00096 449 PANTHER IQ-DOMAIN 5-RELATED 1 385 - -
Pral3965g00096 449 MobiDBLite consensus disorder prediction 325 351 - -
Pral3965g00096 449 Gene3D - 112 162 - -
Pral3965g00096 449 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Pral3965g00096 449 SMART iq_5 110 131 IPR000048 GO:0005515
Pral3965g00096 449 SMART iq_5 132 154 IPR000048 GO:0005515
Pral3965g00096 449 Pfam IQ calmodulin-binding motif 138 153 IPR000048 GO:0005515
Pral3965g00096 449 Pfam IQ calmodulin-binding motif 114 129 IPR000048 GO:0005515
Pral3965g00096 449 Pfam Protein of unknown function (DUF4005) 338 401 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3965g00096 Pral-Chr3965 481436 485890 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3965g00096 1 415 IQD Protein Family AT3G49260 50.881 2.99e-92 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3965g00096 - - aprc:113873497 464.922