Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3965g00083 ATGGACTGCTACTTCAGTGACTTCGATTTACCAAACCTCGATTACCCACATGGCTTCACCTCTTATAATCCCACCTACCCACAGGAAACAATATTGGAGATGTCACCCGTGATGGGTTTAGCTGACATGGATCTTATGGTCCCACCGCCATATGAAAGCAACCCAATTTACTTGAACCAGTTCCCGGAACTCGAAAATTTCGGCTCCAACTTCTCTGGGTTTGATTACAGTATCCCTTCTTTTTATGATGACTTGGTGATCGACGAAAAGCCTTGTACCATTGTTCTGCCCAATCACTCCCAGAGCCGGAGTTTTCCTATTCAAAGGGGCCAATCTTCGAGCTCTATGTTCATTGGGAGTGGGTTTGCCCCTTCTATTAAAACAGAAGAGGACGAGACTAGGAACAGGATTAGCTATAACAGAAAGAAAAGATCAGCTAACTTGGAGTTAGATGATATAAGGAAGTATTTTCATGTTCCCATAACAAAAGCTGCGAAAGAACTGAACGTGGGGTTAACCCTGCTGAAAAGAAGATGCAGAGAGCTTAATATTACCAGGTGGCCTCATAGAAAAATCAAGAGCTTGAAAACCCTCATCGACAATGTCAAGGAACTGGGTTTGGCCAACGAGGTTGCTATGTTGGAGAAGCATAAGAAGCTTATGGAGAAGTTGCCTGATATAGAATTAAGCGAGAGAACTAAGAAGCTGAGGCAAGCATGTTTCAAAGCTAATTACAAAAGGAGAAGATCACTGGGACTCCAAGCCCAGGCCTGA 774 0.4367 MDCYFSDFDLPNLDYPHGFTSYNPTYPQETILEMSPVMGLADMDLMVPPPYESNPIYLNQFPELENFGSNFSGFDYSIPSFYDDLVIDEKPCTIVLPNHSQSRSFPIQRGQSSSSMFIGSGFAPSIKTEEDETRNRISYNRKKRSANLELDDIRKYFHVPITKAAKELNVGLTLLKRRCRELNITRWPHRKIKSLKTLIDNVKELGLANEVAMLEKHKKLMEKLPDIELSERTKKLRQACFKANYKRRRSLGLQAQA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3965g00083 257 PANTHER PROTEIN RKD4 97 256 IPR044607 GO:0003700
Pral3965g00083 257 ProSiteProfiles RWP-RK domain profile. 135 216 IPR003035 -
Pral3965g00083 257 Pfam RWP-RK domain 147 195 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3965g00083 Pral-Chr3965 424707 425854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3965g00083 148 252 AtRKD Transcription Factor Family AT5G53040 66.667 8.41e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pral3965g00083 RWP-RK 1.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3965g00083 - - pcin:129301849 327.405