Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3965g00063 ATGGAATTAGGTTCAAATCCAAAGCCTCCTATGTTGGAGAAAAAGGCAAGGCCTCAGAAAGATCAAGCCTTGAACTGTCCACGGTGCAATTCAACCAACACCAAATTCTGCTACTACAACAACTATAGCCTCTCTCAGCCCAGATACTTCTGTAAGACTTGCAGAAGGTATTGGACTGAAGGTGGCTCTCTCAGGAATGTTCCTGTGGGTGGAGGTTCCAGAAAAAACAAGAGACCTTCTTCTTCTTCATCTTCTTCAGCAGCACCAAAGAAGCTTCCAGAACCTTCTCCTCCGAACCCCACCAGCAACAAGATCCATCAAGCCCAGGATCTTAACCTGGCATACCCAACACCCCCATCACTCCCTCCACAACCTGAGATTTCCGGCAGCTCAAATTCTTCGAGGGGTTTGATGAATTCCTTGATGCCCATGTCGGTTTCATCAGATGGAGGCATGATGTATAACAGTAATAGTAATTCAGCCCATCATGGGTTTCCTTTGGAGTTCAAGCCTCATCATCAAGGGCTTAATTTTAGCTTTGAGGGGTTTGAGAATAATGGGTTTGGAAGTGGTCTTCATCAGGGAATGCAATTGGGTAATTCTGCTGGTGGCGCAAGGATCTTGTTTCCTATTGAAGATTTGAAGCACGTGCCAAGCACCACCCCTAGTCATGAGTTTGATCAGCAAAATACTAGAGGAAGCCATGGAGATCCGAGTGGGTTTTGGAATGGCATGTTAGGTGGAGGAGCATGGTAG 756 0.463 MELGSNPKPPMLEKKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSSSSSSSAAPKKLPEPSPPNPTSNKIHQAQDLNLAYPTPPSLPPQPEISGSSNSSRGLMNSLMPMSVSSDGGMMYNSNSNSAHHGFPLEFKPHHQGLNFSFEGFENNGFGSGLHQGMQLGNSAGGARILFPIEDLKHVPSTTPSHEFDQQNTRGSHGDPSGFWNGMLGGGAW 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3965g00063 251 MobiDBLite consensus disorder prediction 220 251 - -
Pral3965g00063 251 MobiDBLite consensus disorder prediction 75 90 - -
Pral3965g00063 251 MobiDBLite consensus disorder prediction 126 141 - -
Pral3965g00063 251 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Pral3965g00063 251 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 174 IPR045174 GO:0003700|GO:0006355
Pral3965g00063 251 Pfam Dof domain, zinc finger 21 78 IPR003851 GO:0003677|GO:0006355
Pral3965g00063 251 MobiDBLite consensus disorder prediction 62 141 - -
Pral3965g00063 251 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Pral3965g00063 251 MobiDBLite consensus disorder prediction 221 237 - -
Pral3965g00063 251 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3965g00063 Pral-Chr3965 327607 329254 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3965g00063 11 251 C2C2-Dof Transcription Factor Family AT3G61850 40.071 1.08e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral3965g00063 zf-Dof 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3965g00063 - - pcin:129300981 439.884