Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3965g00048 ATGGACGCAGTCTTCAGTGTTTGGCTTGAAGATGGAAGGAAGCAGCAACGCCAGAAGCAACGGCGCGAAACGAACGGACTGGTATTGGGCCTGGCGATCCGACCAGATGAGAGGGAATTCGACGAAACCCACAAACGGGATGTTATTGCTTGTGATGTGATAAATCCTGATGACATGGATGTGGAGTTTGATTCCATTGGAGGGTTGGAAAAGATCAAGCAAGCTTTATTTGAGCTTGTTATACTGCCTCTTAAACGACCAGAGCTGTTTTCTCATGGCAAGCTTCTTGGACCGCAGAAAGGGGTGCTATTGTATGGTCCCCCTGGAACTGGTAAAACTATGCTTGCCAAAGCTATAGCAAAAGAGTCTGGAGCTGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAGTGGTTTGGTGATGCTCAAAAACTTGTGGCAGCTGTGTTTAGCCTGGCCTATAAGCTCCAGCCTGCCATTATATTCATTGATGAAGTTGACAGTTTTCTTGGTCAACGCCGTTCAACCGATCATGAGGCATTATTAAACATGAAAACTGAGTTTATGTCCTTGTGGGACGGATTCACCACAGACCAAAATGCTCGAGTGATGGTCCTTGCAGCAACTAATCGTCCTTCAGAACTTGATGAAGCCATACTTCGGCGTCTTCCTCAAGCCTTTGAAATTGGAGTTCCGGATCAAAAGGAGAGGGTTGAGATATTAAAGGTTATCTTGAAGGGTGAGAGAATTGAAGACGGCATTGACTTTGATCACATAGCTGGCTTGTGTGAGGGTTATACAGGTTCAGATTTATTTGAACTCTGCAAGAAAGCTGCTTATTTCCCAGTTAGGGACCTACTAGATGAAGAGAGAAAAGGGAAACAGTCTCCTGCACCAAGGCCATTGTCACAGTCGGATTTGGAGAAGGTCCTTGCCACTTCAAGGAAAACGAAGGTTGCTGCAGGCGAATACAGTGGATTAACGCTACATTCGCCAAGATGGACGGGGCACAGGGAGTCAGGTGATTATCAGTTTCAAGATGCAATCAGTGAATTATCTAAGCTCGTGGTTTCTCAAATTATTAACTTCCAATCTGATGCTCAGGATCCTTAA 1116 0.4489 MDAVFSVWLEDGRKQQRQKQRRETNGLVLGLAIRPDEREFDETHKRDVIACDVINPDDMDVEFDSIGGLEKIKQALFELVILPLKRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRSTDHEALLNMKTEFMSLWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGVPDQKERVEILKVILKGERIEDGIDFDHIAGLCEGYTGSDLFELCKKAAYFPVRDLLDEERKGKQSPAPRPLSQSDLEKVLATSRKTKVAAGEYSGLTLHSPRWTGHRESGDYQFQDAISELSKLVVSQIINFQSDAQDP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3965g00048 371 ProSitePatterns AAA-protein family signature. 204 223 IPR003960 GO:0005524|GO:0016887
Pral3965g00048 371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 291 IPR027417 -
Pral3965g00048 371 Pfam ATPase family associated with various cellular activities (AAA) 102 231 IPR003959 GO:0005524|GO:0016887
Pral3965g00048 371 CDD RecA-like_ATAD1 65 230 - -
Pral3965g00048 371 FunFam ATPase family AAA domain-containing protein 1 60 237 - -
Pral3965g00048 371 Gene3D - 60 317 IPR027417 -
Pral3965g00048 371 Gene3D - 233 313 - -
Pral3965g00048 371 SMART AAA_5 98 234 IPR003593 GO:0016887
Pral3965g00048 371 Pfam AAA+ lid domain 255 290 IPR041569 -
Pral3965g00048 371 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 29 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3965g00048 Pral-Chr3965 249563 258986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3965g00048 57 298 Calmodulin-binding Proteins AT3G56690 35.102 8.50e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3965g00048 K22530 - gmx:100796908 567.385