Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3965g00027 ATGATGAAGATGGTTCCTCATAATCACCACCACCGTCCATTATCGCCATTTGATAACGATTCCTGTGCGGAGGGTGGTGATGGCGATGGCCCCACCACAACTTGTTCTGTGTCTATGTATAATATGACTCATCATCATCATAATATAAACGATGCTGTTAGTGGAGTTTCTGCTTCTCCTGCTGTCTCTGCAGCAGCTATTCATAGTGGGGGTTCTGCCGTAAGAACTTTGCAGCCTTTTTACATTTCCACTCGCCCTGCCTTCAAATCCCCAGGGGCGATGGCGGCTTCATTAGGATTCCCTTTCACAAATGCGCAATGGAAGGAGCTTGAAAGGCAAGCTATGATTTACAAGTACATGATGGCTTCTGTTCCTGTTCCTCCTAATCTCCTCATCCCCACCGCTCTCACGTCTGCTTCTTGCTCTCCCTTCGATAGTGGTTTTAATCTGCGGCTGTCTAGTAGCAGCACTGATCCAGAGCCGGGGAGGTGCAGGAGAACAGATGGGAAAAAATGGAGATGTTCCAGAGATGTGGCTCCTAACCACAAGTACTGTGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCAAACAACCGACGGCGCCACCACCGACAACAACCAGCAACAGAAAAGGGCTCGCCAAGATTTTCATCATCCTTATCCTACATCTGCAGTTACTGTGGCTGTTTCTCCTCCCACGATTACAAACTTTGGGTCTTCTTCTCTGTTTCTTCAGTCTCCCACCAGTCAGACATTTCACGAACCCTACCATTATGGTGTCAAAGCCTCCAGTTTTGGATCTTTGGCCTCTGTGCCATCTGATAGCCAACCCAGGGGCTTGGACTGGATGCTGAAGGGAGATCCCATTTCCACGGCTGCTTCTGATCTAGAATGGCAGCCTCTGATGCAAGCTAAAGCTGATCTGATTAAACAGAGTGCCTGCAACAACAACAACAACGCCACCATATCTAGTTCAAGTTACGAAGACGCTCTGTACCTCAGTTCCTTTGCGTCTTTGAACTCAGGACTAGACCAACAAAACAGACGTTGCTCTCTGTTCCTGAATCCTCTCCTTCCCATGGAGAATCCCGAGCCCCAGAAACCCAGGAGATTCATTGACGCTTGGTCTAATGCTGAAACGGTGGAAAATAATAATGGCAACGCCAGCAAAAGCCCTGTTTCGTCAGATGCTAAACTATCCCTTTCTTCTCTTGATCTATCAATGGGTGGTGGTTCTGTGGTGGATGCGGAAATGGGTTCTATTCATATGGGTTTAGGCCTAATGGAGCCCAATGGAAACACAGAAAATGGCAACAAAACCCATCTTTCTAATTGGCTCACTCCTGCTGCAACGTGGGCGGGTTCCACACCTGGGGGGCCCCTAGCTGAGGTTCTAAGGCCAAGCACTGTGGCTCCGGCCACCGAGGGGGCATCCAACCCGCCGTCTCCGGTCATAACAAATGCCGAATCTGGCAGTCCCCTGGCAACAATGGTGTCATCTCCATCTGGGGTTTTGCAGAAAACGCTGGGATCCATGTCTGATTGTAGTACCAATAGTAGCCCAACAGTGGCGTCTCCAAGGGCCAATTCTGAGTTTGCCTTGCTCTTGTTCAATAAAGCAATTTAG 1647 0.4918 MMKMVPHNHHHRPLSPFDNDSCAEGGDGDGPTTTCSVSMYNMTHHHHNINDAVSGVSASPAVSAAAIHSGGSAVRTLQPFYISTRPAFKSPGAMAASLGFPFTNAQWKELERQAMIYKYMMASVPVPPNLLIPTALTSASCSPFDSGFNLRLSSSSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVQTTDGATTDNNQQQKRARQDFHHPYPTSAVTVAVSPPTITNFGSSSLFLQSPTSQTFHEPYHYGVKASSFGSLASVPSDSQPRGLDWMLKGDPISTAASDLEWQPLMQAKADLIKQSACNNNNNATISSSSYEDALYLSSFASLNSGLDQQNRRCSLFLNPLLPMENPEPQKPRRFIDAWSNAETVENNNGNASKSPVSSDAKLSLSSLDLSMGGGSVVDAEMGSIHMGLGLMEPNGNTENGNKTHLSNWLTPAATWAGSTPGGPLAEVLRPSTVAPATEGASNPPSPVITNAESGSPLATMVSSPSGVLQKTLGSMSDCSTNSSPTVASPRANSEFALLLFNKAI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3965g00027 548 MobiDBLite consensus disorder prediction 202 216 - -
Pral3965g00027 548 Pfam WRC 159 201 IPR014977 -
Pral3965g00027 548 MobiDBLite consensus disorder prediction 188 220 - -
Pral3965g00027 548 Pfam QLQ 101 133 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral3965g00027 548 SMART QLQ_2 100 136 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral3965g00027 548 ProSiteProfiles WRC domain profile. 158 202 IPR014977 -
Pral3965g00027 548 MobiDBLite consensus disorder prediction 1 25 - -
Pral3965g00027 548 PANTHER GROWTH-REGULATING FACTOR 5 67 409 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pral3965g00027 548 ProSiteProfiles QLQ domain profile. 101 136 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3965g00027 Pral-Chr3965 131648 134419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3965g00027 378 524 GRF Transcription Factor Family AT5G53660 37.736 9.33e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pral3965g00027 WRC 5.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3965g00027 - - qsa:O6P43_014940 608.601