Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3965g00026 ATGGGGAAGGCAGGAGCAAGCTCTTGGTTGACTGCAGTTAAAAGGGCTTTCCGGTCCCCAACAAAAGAAACCGATAAGAGAAGCAGTAGCAGGAGAAGAGAAGAACCCGAACAGGAGGAGGAGGAGGAAAAGAGGAGGGGAAAGCGAAGATGGATTTTCAGGAAGCCGTTGGGTCAAGAAACAGTAGTCACTCAGCTTTCTGAGGAAAGAACTAAAACCACTACTGGTGATATTACAGCAACAAGTAGTAATGTTTCTGAAGTAGTTGACGCTGATCCGCAAAGGCACGCAATTGCAGTAGCCATGGCAACTACAGCGGCTGCTCAGGCAGCCGTAGCATCTGCTCAGGCAGCCGTGGAGGCTGTACGGGTTGCAAGGTCGTCCATCTTTGTCAGACGCCACCATGCTGCCACGACTATTCAAACAGCCTTCAGAGGTTATCTGGCGAGAAGAGCACTTAGGGCACTTAAAGGGTTAGTAAAGCTGCAGGCATTAGTGAGAGGTCATAATGTCCGCCAGAGAGCGAAATTTACCCTTCAGTGCATGCAAGCCCTTGTTCGAGTTCAAATTCGGCTATGTGAACAACGAGCTAGGAGGATTTCTCAACATGGAAGCACTGATTCCAGACTAAGTGACTGTGATTCCTCTAATAATATATGGGGATCACATTTAGTTGACAGCAAGTCCATTTGTAGAGATGATGAAGCACAAACCGTTGACAAGATTCGAGCTTCTCTTAAGAAAAAGAAGGAAGTTGCCTGGAAACGTGAAGAAGCTCTGGTTGATGCTTTCTCTCAACAGATATGGAGAACTCGCGGGGAGCCCAGCGCGAGTGAGGGAGAGGCTGAGGAAGTCTCTAGATGGTCTGATCCATGGACAGGAAGAAGAAGAAGCTTGAACAGAGAGAGTACAGGTAGAGCTTCGTGTGATCAAAGAGACCCTATTAAAATAGTTGAAATAGACACATTTAGACCCTACTCCAATGCCACGAGGTCATCATCTTGTGGGTATAAGCCTCAGTTCAATTCTTCACTTAGAAGCCATACCCTTCCTTTGTCTTCACCGGTGCATAAAGCCCAGTGTGAAGCCTCATCACCAAGAAAGACGAAGCAGCATCTTCAGGTGCATTCAGCTAGTGGTCCTCGTTGCACCACCAAGTCCATATATTCAATGCATGATGGTTCAGTGCCTAACTATATGGCTGCCACTGCTTCTGCCAAGGCTCGACTTCGCTCATTGAGTGCACCCAGGCAGAGGACTTCAAGCCCACAAAAGCAGCAACACTATAAAGCTCAAATATTTGATTAA 1308 0.4732 MGKAGASSWLTAVKRAFRSPTKETDKRSSSRRREEPEQEEEEEKRRGKRRWIFRKPLGQETVVTQLSEERTKTTTGDITATSSNVSEVVDADPQRHAIAVAMATTAAAQAAVASAQAAVEAVRVARSSIFVRRHHAATTIQTAFRGYLARRALRALKGLVKLQALVRGHNVRQRAKFTLQCMQALVRVQIRLCEQRARRISQHGSTDSRLSDCDSSNNIWGSHLVDSKSICRDDEAQTVDKIRASLKKKKEVAWKREEALVDAFSQQIWRTRGEPSASEGEAEEVSRWSDPWTGRRRSLNRESTGRASCDQRDPIKIVEIDTFRPYSNATRSSSCGYKPQFNSSLRSHTLPLSSPVHKAQCEASSPRKTKQHLQVHSASGPRCTTKSIYSMHDGSVPNYMAATASAKARLRSLSAPRQRTSSPQKQQHYKAQIFD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3965g00026 435 MobiDBLite consensus disorder prediction 1 47 - -
Pral3965g00026 435 MobiDBLite consensus disorder prediction 271 310 - -
Pral3965g00026 435 MobiDBLite consensus disorder prediction 408 435 - -
Pral3965g00026 435 MobiDBLite consensus disorder prediction 18 47 - -
Pral3965g00026 435 Pfam Protein of unknown function (DUF4005) 366 430 IPR025064 -
Pral3965g00026 435 PANTHER IQ-DOMAIN 5-RELATED 1 425 - -
Pral3965g00026 435 Pfam IQ calmodulin-binding motif 134 154 IPR000048 GO:0005515
Pral3965g00026 435 Pfam IQ calmodulin-binding motif 160 176 IPR000048 GO:0005515
Pral3965g00026 435 ProSiteProfiles IQ motif profile. 157 184 IPR000048 GO:0005515
Pral3965g00026 435 Gene3D - 131 184 - -
Pral3965g00026 435 SMART iq_5 132 154 IPR000048 GO:0005515
Pral3965g00026 435 SMART iq_5 155 176 IPR000048 GO:0005515
Pral3965g00026 435 MobiDBLite consensus disorder prediction 276 310 - -
Pral3965g00026 435 MobiDBLite consensus disorder prediction 414 435 - -
Pral3965g00026 435 ProSiteProfiles IQ motif profile. 133 161 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3965g00026 Pral-Chr3965 128454 130188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3965g00026 1 425 IQD Protein Family AT1G01110 38.923 3.91e-67 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3965g00026 - - pcin:129295891 545.043