Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3965g00025 ATGAAGAAGACATTTCATATTCCTCTCGCATTATTTCTCCTTTTCCTCCAACTTTACTTCCATCACATCCTCTGTGATGACAAAGATGCCCTTCTTTCATTCAAATCCCAAGTCGCTGACACAAAGGATTCTCTTTCTAGTTGGAATTCTAATTCCTCTATCTGCTCTTGGCATGGAGTTTCCTGCTCCAAAAACACCAACAGAGTTCAATCTCTTAGTCTCCCAGGACTAGGCCTTTCTGGTAATCTACCTTCTTCACTCTTTAACCTCAGTTCTTTACAATCACTTGATCTTTCCAATAATGCATTCCAGGGCCATCTTCCTTTGGAGCTCTCAAATCTTTCTCTTCTTAATGTGATTAACTTAGCTGCAAACAATCTCAGTGGCACACTTCCTTCCCAATTATCCCTTCTACGCCACCTTCAAGTTCTAGACTTCTCTTTGAATAATCTCACTGGTCAAATCCCTCCTGAATTTGGAAACTTTTCCTCTCTCTATAATCTTTCCCTGGCAAGAAACCATCTCTCTGGAGAGATTCCAAGCGATTTGGGCAATCTTCATAATCTTTCTCATCTTCAACTCTCTGAGAATTATTTCTCCGGGGATTTCCCGATTTCTATCTTCAACATCTCTTCGTTGACCTTCTTATCTGTAACACAAAATCATCTTTCAGGAAAATTACCACAACATATAGGCCGTTCTCTTCCAAATCTCAGAGGTTTCTATCTGGCAAACAATGCATTTGGCGGTGTGATTCCTAATTCCATATCCAATGCTTCACATCTCCAAGAAATTGATCTTTCTCACAATGAATTTCATGGAGACCTTCCCTTGTTCAGCAACATGAGCAATCTCACCAGGCTAATTCTTAGCAACAATCAACTCTCTTCTGGAACATCAAAAAATTCTGAGTTCTTTGATTCCCTGAGAAATAGCCCGACGCTGAAAATTCTGATGATCGACTCTAATCAGTTAGCTGGGGAGCTTCCAAAATCCGTAGCAAATCTTTCAACCATTCTAGAACAATTTTGTGTATCCCATAACTTATTCAGCGGAAGCATCCCTCAGGACATAGGAAAATTTCAAAACCTTGTGTCCCTATCTTTTGAAGTAAATCATTTCACTGGAGAGATACCAAGAGACGTGGGAGCATTAAACAAACTGGAGAGACTTCTTTTGTACAAAAACAAGTTATCTGGAGAAATCCCAGACATGTTTGGCAATTTGACTCAACTATCTACCCTTGCATTGCACAATAACAAGTTGTTTGGCAAAATTCCCTCCAGCATTGTACAGTGTCAAAGGTTGAACTATTTGAATCTTCAAATGAACAACCTTCATGGGACCATACCAGAGGGCATTTCTACGCTTTCTAGCTTAACCACCTTGTCCTTGGCAGGGAATACCCTACACGGATCCCTCCCTTTTGAAGTGAGCTCCATGCAGCAACTTCAGTTCTTGGACTTGTCTAACAATCTCATGACCGGATATATTCCCGAAGAAATAGATGGTTGCACAAGCTTGCTGATGCTTCAATTAGCAAGAAACAACTTTAGTGGTCCAATACCGAGTACTTTGGGGAACTTAACGTCATTGGAAACATTGGATTTATCTTCAAACAACCTCACAGGTCCCATCCCATCGACTTTGGAAAAGCTTCGCCCCATGGTGAAGTTGAATTTGTCTTTTAACCATTTGGAAGGGGAAGTTCCCAAGAAAGGTGTTTTTACGAACCTCACCCAGGTTACCCTGCAAGGAAACGGCAAGCTTTGCAGTCCTAACAAAGAAGTTGCGGAAAGATTGAGAATCACTTTCTGTGTCAAAGGTAAAACGCACACTAGATTTTTACTCCCTCTTATACTTGCACTTACAAGTGCCTCTATTTTATGCGTCTCCATTTGCTTAGTGTGGATGAAATGTTTTCGAAAGAAGGATGATGAAACATGTTCTTCAATGTCCCCTCTGAAGGGATTTCCTCAACATATATCCTTTTCGGATATTCGAACTGCCACAAACAATTTTGCATCTGAAAACCTGATAGGAAACGGGGGGTTTGGCTCCGTCTACAAGGGTCTTTTCAGCATCAGCCACAGTGAAACTACTCTTGCCGTGAAAGTACTCGACTTGAAACTAAGCGAGGCTTCCCAGAGTTTCGTTGCAGAGTGTGAAGCTTTGAAGAACGTCAGGCATAGGAACCTCGTGAAGCTCATCACTTCTTGTTCGGGTATTGATTACAAAGGTGATGACTTTAAAGCTTTGGTTATGCAATTCATGACCAACGGTAGTTTGGACACATGGTTGTACCCAGTGGACGAAGAATCAGGGTCCTCCTTGACTTTCTTGCAGAGATTGAATATTGCCTTAGATATTGCTAACGCCATGGACTATTTACACCATGACTGTGACCCACCAGTAGTCCACTGCGATCTGAAACCTGGTAATGTCTTGTTAGATGAAACTATGGTAGCCCATCTTGGAGATTTTGGACTTGCAAGGCTTCTTTCACAGGATTCACTGGAGTCTGTCACTCTAGGACTGAAGGGTACCGTCGGCTATATTCCACCAGAATACGGTCTGGGTGGCAAGGCATCGACCGCCGGAGATGTCTATAGTTTTGGGATTTTACTGCTCGAGATGTTCATGGGAAAGAAGCCAACTGATGAGATGTTCAAGGAAGGTTTATGTCTAGAAGAGTTTGTGTCAGCCATGGACGAGAAACAAATACTGAATGCAGTTGATCCAAAGCTTTTTAACGATTTTGAATGGTCAACAACACAAAGCTCACCAAGCCCTGGTTTTCATAGTGAAGGCAGCACTAGTGACAGCTATAATAGTTCTAGTTTCACATTGTGCCAGCGCAAAGCAGAGAAGTGTGTGGCCGAAGTGATAAGAGTTGGCTTGGCTTGTGCTGCTGAAGTGGCCACAGAACGCTTGACCGCAAGAGAGGCCTCAAAAAAATTACAGGCAATCAGGCAGGCTCTGCTGGCTATATGA 2994 0.4228 MKKTFHIPLALFLLFLQLYFHHILCDDKDALLSFKSQVADTKDSLSSWNSNSSICSWHGVSCSKNTNRVQSLSLPGLGLSGNLPSSLFNLSSLQSLDLSNNAFQGHLPLELSNLSLLNVINLAANNLSGTLPSQLSLLRHLQVLDFSLNNLTGQIPPEFGNFSSLYNLSLARNHLSGEIPSDLGNLHNLSHLQLSENYFSGDFPISIFNISSLTFLSVTQNHLSGKLPQHIGRSLPNLRGFYLANNAFGGVIPNSISNASHLQEIDLSHNEFHGDLPLFSNMSNLTRLILSNNQLSSGTSKNSEFFDSLRNSPTLKILMIDSNQLAGELPKSVANLSTILEQFCVSHNLFSGSIPQDIGKFQNLVSLSFEVNHFTGEIPRDVGALNKLERLLLYKNKLSGEIPDMFGNLTQLSTLALHNNKLFGKIPSSIVQCQRLNYLNLQMNNLHGTIPEGISTLSSLTTLSLAGNTLHGSLPFEVSSMQQLQFLDLSNNLMTGYIPEEIDGCTSLLMLQLARNNFSGPIPSTLGNLTSLETLDLSSNNLTGPIPSTLEKLRPMVKLNLSFNHLEGEVPKKGVFTNLTQVTLQGNGKLCSPNKEVAERLRITFCVKGKTHTRFLLPLILALTSASILCVSICLVWMKCFRKKDDETCSSMSPLKGFPQHISFSDIRTATNNFASENLIGNGGFGSVYKGLFSISHSETTLAVKVLDLKLSEASQSFVAECEALKNVRHRNLVKLITSCSGIDYKGDDFKALVMQFMTNGSLDTWLYPVDEESGSSLTFLQRLNIALDIANAMDYLHHDCDPPVVHCDLKPGNVLLDETMVAHLGDFGLARLLSQDSLESVTLGLKGTVGYIPPEYGLGGKASTAGDVYSFGILLLEMFMGKKPTDEMFKEGLCLEEFVSAMDEKQILNAVDPKLFNDFEWSTTQSSPSPGFHSEGSTSDSYNSSSFTLCQRKAEKCVAEVIRVGLACAAEVATERLTAREASKKLQAIRQALLAI 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3965g00025 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 758 997 - -
Pral3965g00025 997 Pfam Protein tyrosine and serine/threonine kinase 677 892 IPR001245 GO:0004672|GO:0006468
Pral3965g00025 997 Gene3D Phosphorylase Kinase; domain 1 656 757 - -
Pral3965g00025 997 Gene3D Transferase(Phosphotransferase) domain 1 758 995 - -
Pral3965g00025 997 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 309 989 - -
Pral3965g00025 997 SUPERFAMILY L domain-like 340 594 - -
Pral3965g00025 997 Gene3D Ribonuclease Inhibitor 475 598 IPR032675 -
Pral3965g00025 997 Gene3D Ribonuclease Inhibitor 379 474 IPR032675 -
Pral3965g00025 997 Gene3D Ribonuclease Inhibitor 232 378 IPR032675 -
Pral3965g00025 997 FunFam LRR receptor-like serine/threonine-protein kinase EFR 301 611 - -
Pral3965g00025 997 ProSiteProfiles Leucine-rich repeat profile. 531 554 IPR001611 GO:0005515
Pral3965g00025 997 ProSitePatterns Protein kinases ATP-binding region signature. 680 705 IPR017441 GO:0005524
Pral3965g00025 997 FunFam Leucine-rich repeat receptor-like kinase 27 141 - -
Pral3965g00025 997 SMART LRR_typ_2 235 259 IPR003591 -
Pral3965g00025 997 SMART LRR_typ_2 409 433 IPR003591 -
Pral3965g00025 997 SMART LRR_typ_2 529 553 IPR003591 -
Pral3965g00025 997 SMART LRR_typ_2 457 478 IPR003591 -
Pral3965g00025 997 SMART LRR_typ_2 385 408 IPR003591 -
Pral3965g00025 997 SMART LRR_typ_2 481 505 IPR003591 -
Pral3965g00025 997 SMART LRR_typ_2 282 308 IPR003591 -
Pral3965g00025 997 SMART LRR_typ_2 90 114 IPR003591 -
Pral3965g00025 997 SMART LRR_typ_2 162 186 IPR003591 -
Pral3965g00025 997 SMART LRR_typ_2 138 161 IPR003591 -
Pral3965g00025 997 PRINTS Leucine-rich repeat signature 484 497 - -
Pral3965g00025 997 PRINTS Leucine-rich repeat signature 529 542 - -
Pral3965g00025 997 SMART serkin_6 674 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3965g00025 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Pral3965g00025 997 Gene3D Ribonuclease Inhibitor 173 231 IPR032675 -
Pral3965g00025 997 FunFam LRR receptor-like serine/threonine-protein kinase EFR 645 757 - -
Pral3965g00025 997 Pfam Leucine Rich Repeat 531 553 IPR001611 GO:0005515
Pral3965g00025 997 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Pral3965g00025 997 SUPERFAMILY L domain-like 24 297 - -
Pral3965g00025 997 SUPERFAMILY Protein kinase-like (PK-like) 650 985 IPR011009 -
Pral3965g00025 997 ProSiteProfiles Protein kinase domain profile. 674 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3965g00025 997 Pfam Leucine rich repeat 459 518 IPR001611 GO:0005515
Pral3965g00025 997 Gene3D Ribonuclease Inhibitor 24 172 IPR032675 -
Pral3965g00025 997 FunFam Leucine-rich repeat protein kinase family protein 158 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3965g00025 Pral-Chr3965 124207 127549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3965g00025 27 992 Receptor kinase-like Gene Family AT3G47570 39.901 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3965g00025 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3965g00025 - - gmx:100802571 1132.09