Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3965g00004 ATGGTTGTTGTGCCTGATGGCCTGAAGGCATGGGAGATACTGAAGGGAAGACCACACAATGTTGACCTTATACTAACAGAAGTGGATTTGCCATCAATATCTGGTTATGCTCTTCTCACATTGATTATGGAGCATGAAGTTTGCAAAAACATTCCAGTTATAATGATGTCTTCGCAAGATTCAATCAACACAGTCTACAAATGCATGTTGAGAGGTGCTGCTGACTACCTTGTCAAGCCCCTTAGAAAGAATGAGCTGAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCTTCAACCTCTGGTTTAAACGGTCTTGAAGACGAGAGTGTTGCACAAACGAAGGCTGAAGCCACTGCTGAAAACAATGCTCCAGATAATCATTCAAGTGGCGATGCTGCATGCATTCAAAGAAATAAGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCTTGTGCAAAGCCTGATTTGGAAGCTGAGAGTTCTCCGATGGATCATGTGTATGAATCTTCCCGACTAAAACAGGTCGAACCATACCCAAGAGAAACAAATATGCAGGACGTTGAAATGTGCATTCAAGTAGGCCAGGCCTTGGCTTTGCATGACAATCACGCAGAAGGATTAACAGTCGAGATCCGCAAGCGTGGTGAGACTAATTCAGCTTATGGCAAGGATGGTGACCAAGAACATTTTAGGAGTCCTGACACCAGTCAGGAGGCTTATGACAATCACAATGTTCAAATTACCTCTTCAAAGGAAGCTATTGACTTGATTGGAGCATTTCGAAATCATCTAAACAGCAGTCACAAAAGTTCCTCAGTCAACTGCACGGGCAAGTTTGACTTTTCTCCTCAGCTTGATCTTTCCTTAAGAAGATCTCATCCAGGCAGCTTTGAGAATGAAACTACTAAAGAAAGGCATGCCCTGATGCATTCCAATAGCTCAGCTTTCAGACGGTATACTAACAGGCAAACACAGGCCCCGCCTGCAGTGTCCATAAACTGCTGCAATCAAGAAAGAGAAAAGAGAACAAATTGTGGGAACAACATCTCAAACATGGCAGGCTATAACTTGGATATTTCAATGCCTAACTTTCAAGGAAGTATTGTGTCTTCAGCCACACAGCAGTCAAAAGAATCCGAGCTCCCAACTTCACCCTCCCAGCGTCGGCTTTCACTTCCAATCCCAGTAAAAGCTGTAAGGTACGATGATCCATGCGCGACCTATGGTTCTGCACTTCCTCCTATGTTCTGTACGCAGTCAGGGCCCGCATCCACACTAAATCCAGAGTTGGTGCCACACCGTGAACCAACCTTTCAAGTGAATGGTTTTTATCAGTCGAATACCAAAGAAGAAAGTTCAGAGCAGCGTTATGATCCTCAAGGTAAAAATGGAAGCAACACAACAGGCCACGTTGTATACATGCAGGAAAGCAATTTGGAACATGTGGAGGATCAAAGACACATCTCTCCCACAACTGGTCAAAGTGCCTGCACTAACAGCAACGCCGATCAGGTTGCCATGGCCAGGGCAGCTTCAGAGAGCATGACGGAAGAGCTCTCAAACAATGGGAGTTCTCATCGATCTAGATTAAGAGAAGCAGCTCTGAACAAATTCCGCTTGAAACGGAAAGAGAGATGCTTTGAAAAGAAGGTTCGATATGAAAGCAGAAAGAAACTTGCAGAGCAGCGTCCTAGAGTGAAGGGCCAATTTGTTCGTAAAGCGCAGCAATATTCTCAGGCTACAGAAAAAGATGGTTGA 1764 0.4439 MVVVPDGLKAWEILKGRPHNVDLILTEVDLPSISGYALLTLIMEHEVCKNIPVIMMSSQDSINTVYKCMLRGAADYLVKPLRKNELRNLWQHVWRRQSSTSGLNGLEDESVAQTKAEATAENNAPDNHSSGDAACIQRNKELIEKGSDAQSSCAKPDLEAESSPMDHVYESSRLKQVEPYPRETNMQDVEMCIQVGQALALHDNHAEGLTVEIRKRGETNSAYGKDGDQEHFRSPDTSQEAYDNHNVQITSSKEAIDLIGAFRNHLNSSHKSSSVNCTGKFDFSPQLDLSLRRSHPGSFENETTKERHALMHSNSSAFRRYTNRQTQAPPAVSINCCNQEREKRTNCGNNISNMAGYNLDISMPNFQGSIVSSATQQSKESELPTSPSQRRLSLPIPVKAVRYDDPCATYGSALPPMFCTQSGPASTLNPELVPHREPTFQVNGFYQSNTKEESSEQRYDPQGKNGSNTTGHVVYMQESNLEHVEDQRHISPTTGQSACTNSNADQVAMARAASESMTEELSNNGSSHRSRLREAALNKFRLKRKERCFEKKVRYESRKKLAEQRPRVKGQFVRKAQQYSQATEKDG 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3965g00004 587 MobiDBLite consensus disorder prediction 146 165 - -
Pral3965g00004 587 MobiDBLite consensus disorder prediction 115 132 - -
Pral3965g00004 587 MobiDBLite consensus disorder prediction 218 239 - -
Pral3965g00004 587 ProSiteProfiles Response regulatory domain profile. 1 94 IPR001789 GO:0000160
Pral3965g00004 587 MobiDBLite consensus disorder prediction 101 132 - -
Pral3965g00004 587 MobiDBLite consensus disorder prediction 371 390 - -
Pral3965g00004 587 Gene3D - 1 215 - -
Pral3965g00004 587 Pfam Response regulator receiver domain 3 88 IPR001789 GO:0000160
Pral3965g00004 587 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 267 IPR045279 GO:0009736
Pral3965g00004 587 ProSiteProfiles CCT domain profile. 533 575 IPR010402 GO:0005515
Pral3965g00004 587 SUPERFAMILY CheY-like 2 106 IPR011006 -
Pral3965g00004 587 MobiDBLite consensus disorder prediction 512 532 - -
Pral3965g00004 587 Pfam CCT motif 533 575 IPR010402 GO:0005515
Pral3965g00004 587 MobiDBLite consensus disorder prediction 516 531 - -
Pral3965g00004 587 MobiDBLite consensus disorder prediction 218 238 - -
Pral3965g00004 587 MobiDBLite consensus disorder prediction 450 471 - -
Pral3965g00004 587 MobiDBLite consensus disorder prediction 558 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3965g00004 Pral-Chr3965 22704 26648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3965g00004 254 577 Response Regulator Gene Family AT5G24470 32.121 6.51e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral3965g00004 Response_reg 3.5e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3965g00004 K12130 - gmx:100777119 733.406