Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3963g00007 ATGGGTGTGGCTCCTAACTGTCATCCGCCGCCGCCGCCGCCGCCGCCGCCTGCGGATGAGACGGCGGTGTTACCTCTGAATTCGCTGCCTCTGGGTTTCAGATTTCGGCCCACCGACGAGGAGCTTGTTGATTATTACCTGAGACAGAAGATTAATGGTTATGGCGACGATGTCTGGGTTATTCGGGAAATCGATGTTTGCAAATGGGAGCCCTGGGATTTACCTGACTTATCAGTGATACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCCCAGGACCGCAAGTATCCGAATGGCCATAGATTGAACCGAGCAACAAATCACGGGTACTGGAAGGCAACTGGCAAGGATCGCAGAATTAAGTCTGGGTCCAACTTGATAGGAATGAAGAAGACTTTAGTCTTCTATAGTGGTCGTGCTCCCAGGGGGAAGAGGACCCATTGGGTTATGCATGAGTACCGTCCCACTATTAAGGAGCTTGACGGTACCAATCCTGGGCAGAATGCCTATGTGCTCTGTCGCTTGTTTAAGAAACAAGATGAGAGTCTTGAAGCTGATGAAACAGAACGGACTGCGTCAACTCCTACTGTTGCTAATTACTCTCCAGAAGAAATACAGTCTGATGCTGCTATGGCTATGGTATCCCCGTCGCCAGCTCCAGAAGATGATAAGCGGCAGATAGCTGCATTCTGTGTTTCCGAGAACACTGAAGAAACCACATCTAACGTAATAACATCAGCTGATTGCCATAGTGATGGAGGTGATGCTAACGACGCACAAACCCAAAATGCGGATAAAACAGCTTTAGAGGAGGATCCACTGGTGAACCTTGATATATTTAAGGAACCAATAACTAGGCCATTTGATGACAAGATGTTCTCCCCAATACATGTGCATATGCCGTCAGAATTTTATGATCCAGTGTGCAATGACTCAGATGGTCAATTTGGGCTGCAACTTCCATATGGTACAAATGAGACAAATATTTCAGACTTCTTCGACTCATACATCAATTGTGGTGACTTGTCCTGTGAAGACTATATCAGTCAAAAGCCAACCTCTGGCATTCTAAATCCTTGTGACAATGGATCTGGGAATGGCTCAGATGTGAAAATGGCCGATATGCTGTATTGGCAAGCTCTGCATACTGCGCATCCTCAGGAGGAAATTGACAAGAGGGTTCCTTCCATGATAGATGCAGCTTCAGACTTTAACAGACCCATTACCTCTGAGCTCAGTGGTTATGAGCAGAAGGGCAATATGAGGATATACGACAGCTATCCTCCGATGGCTTTGGCATCTGATGCTGCTTTTGACCCAGTCTATGGCGTATTAAATAGCTGTCAAGAACCAAGAAACTACAATACAGTTGGCGGTGATAATGGTGCTGGGATCAGGATTAGGGCTCGCCAAGTGCGAAGTGAACAGGTAAACATGAACCCTATGAACCAAGGACAGGGTACTGCTCCAAGGAGGATACGTCTACATATATCTACACCTACCTCTAATGAAGTCGAGAAAGACGGGAGATGTGCGCAAGAAAACCATTATTCAAAACCAATTATCACATGGGAGACCGGAGCCTTAGAAAATAATGCTGCTGAAGAGGATGCTACTCATACTGGGAGTGAACCCCTGACTCCCGAGTCAGTTGACAGTAACAAGGTTTCTCCCCTGTTTGTTACAAATGAAGATTCCCTCTCAGGATTGAAAGAGAGCTTGTTGTGCAAATCAGTTCGGGGCACATCAAAGGCTTTTTCTCGTGCCAGAGTCTGGGCATCTACGTTGGTAGTCTCTGTCAGTTTAATGGCCGCAGTAGTATTTATAGCTAACAGATGGGGAGTTCTTGACTTTTGA 1860 0.4651 MGVAPNCHPPPPPPPPPADETAVLPLNSLPLGFRFRPTDEELVDYYLRQKINGYGDDVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRRIKSGSNLIGMKKTLVFYSGRAPRGKRTHWVMHEYRPTIKELDGTNPGQNAYVLCRLFKKQDESLEADETERTASTPTVANYSPEEIQSDAAMAMVSPSPAPEDDKRQIAAFCVSENTEETTSNVITSADCHSDGGDANDAQTQNADKTALEEDPLVNLDIFKEPITRPFDDKMFSPIHVHMPSEFYDPVCNDSDGQFGLQLPYGTNETNISDFFDSYINCGDLSCEDYISQKPTSGILNPCDNGSGNGSDVKMADMLYWQALHTAHPQEEIDKRVPSMIDAASDFNRPITSELSGYEQKGNMRIYDSYPPMALASDAAFDPVYGVLNSCQEPRNYNTVGGDNGAGIRIRARQVRSEQVNMNPMNQGQGTAPRRIRLHISTPTSNEVEKDGRCAQENHYSKPIITWETGALENNAAEEDATHTGSEPLTPESVDSNKVSPLFVTNEDSLSGLKESLLCKSVRGTSKAFSRARVWASTLVVSVSLMAAVVFIANRWGVLDF 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3963g00007 619 ProSiteProfiles NAC domain profile. 29 179 IPR003441 GO:0003677|GO:0006355
Pral3963g00007 619 MobiDBLite consensus disorder prediction 536 555 - -
Pral3963g00007 619 Pfam No apical meristem (NAM) protein 30 155 IPR003441 GO:0003677|GO:0006355
Pral3963g00007 619 FunFam Nac domain-containing protein 86 38 182 - -
Pral3963g00007 619 SUPERFAMILY NAC domain 23 179 IPR036093 GO:0003677|GO:0006355
Pral3963g00007 619 Gene3D NAC domain 38 183 IPR036093 GO:0003677|GO:0006355
Pral3963g00007 619 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 28 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3963g00007 Pral-Chr3963 35775 39219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3963g00007 22 521 NAC Transcription Factor Family AT4G35580 39.764 2.92e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3963g00007 NAM 4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3963g00007 - - gmx:100778903 617.846