Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3963g00004 ATGGGAGGTGTGAAAGAATGGTTCAAGTCGTCGACATCGCAGGCCGTAATAAGCATGTTATTGGTGCAAGTTTTCGCGACAGGGATGCAGTTGCTGTCGAGGTTGATTCTGGTCGAGGGCACCTTTGTTTTCTCACTCATTGCTTATCGTCATGTCGTTGCTACCCTCTGTGTTGCCCCTTTTGCTTTCTATTTCGAGAGAGGACATGCTAAGAATTTGAATTGGTCGGTCTGGTTCTGGGTCTTCCTCAATGCATTAGTCGGGATAATAATGGCAATGGGCTTCTTCTATTATGGTCTACGAGACACTTCAGCAACTTATTCAGTCAATTTTCTTAACTTGGTTCCCATATTTACCTTCCTAGTTTCTATCATATTCAGAATGGAGAAATTAGGATTGAAGACATGGGCCGGTAAAGCCAAGGCCATTGGGACAATTATATGTGTTGGAGGAGCATTAACCACTAGCCTTTACACTGGAAAGGAATTTTATATTGGTCATCATAGTCATCACTCCCCTCACACTGCTTCAGCAAAAGCACCCAAGACTCACATGCTTCGAGGCACATTTTTTCTAGTTGCAAGCTGCTGCTCATATACAGGATGGTTTATTGTCCAAGTGAAGTTGCTAAAAGCTCTTCCATTGAAGTTTTGGGCAACAATGCTAACCTGTATCACGGCTACAATTCAAGCTGTTTTGGTAGGGCTATGCATCGACCATAGCAAAGCTTCTTGGTCTTTAGGTTGGAATATGGAACTGATCACTATAGTATACTCAGGGGCCCTCGCTACAGCTGCTACATTCTGCTTAATATCTTGGATCGTTACATTGAAGGGGCCTGCTTATCCTTCAATGTTCAATCCACTAGCTCTTATCTTTGTAGCCTTTTCAGAAGCTCTTTTACTGGGTGAACCACTCAAAGTTGGAACCTTGGTGGGCATGGTTTTTATCATAACCGGCTTGTACTGCTTCCTGTGGGGTAAAACAAAGGAGACACGCAACATGGCCCAACCAAATGAAGCAGCTATTGGAGTTTCCACACTCACACCTTCTGATTCTGCTAGTTTTCAATCAACAGCCAGAGTAATTCCAAGTGCTTCGCCAAACAATATGGTTATCGACATAGAAAATAGTGATACAGTAGAAAAAACCCCGAACCTTAATTAA 1167 0.4293 MGGVKEWFKSSTSQAVISMLLVQVFATGMQLLSRLILVEGTFVFSLIAYRHVVATLCVAPFAFYFERGHAKNLNWSVWFWVFLNALVGIIMAMGFFYYGLRDTSATYSVNFLNLVPIFTFLVSIIFRMEKLGLKTWAGKAKAIGTIICVGGALTTSLYTGKEFYIGHHSHHSPHTASAKAPKTHMLRGTFFLVASCCSYTGWFIVQVKLLKALPLKFWATMLTCITATIQAVLVGLCIDHSKASWSLGWNMELITIVYSGALATAATFCLISWIVTLKGPAYPSMFNPLALIFVAFSEALLLGEPLKVGTLVGMVFIITGLYCFLWGKTKETRNMAQPNEAAIGVSTLTPSDSASFQSTARVIPSASPNNMVIDIENSDTVEKTPNLN 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3963g00004 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 330 - -
Pral3963g00004 388 PANTHER WAT1-RELATED PROTEIN 15 337 IPR030184 GO:0016020|GO:0022857
Pral3963g00004 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 149 - -
Pral3963g00004 388 Pfam EamA-like transporter family 16 146 IPR000620 GO:0016020
Pral3963g00004 388 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3963g00004 Pral-Chr3963 15825 18231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3963g00004 11 380 Nodulin-like Gene Family AT5G07050 29.551 2.26e-63 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3963g00004 - - gmx:100780316 510.375