Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3963g00003 ATGGCTTCCTTCTATTTCATCTTCTTGTTCTGCGTATTTACTCTTCTAGCTTCGATTGGAGAACACCAAGTTATTGCTTTTTCATCCGCCATTAACGTAACCAAACAATTCCACTTCCCCGATTTCAGCGCAAGCAATAACTCCAGAATTCTTCATGATGTGAAGCTTCTAGGCAGTGCCAAATTCTCAGAAGAAAAGGGTGCTCTTCAAATTCCTGATGACTCCTCAGATATCAGACATCGAGCAGGAAGAGGCATTTATTCCTTCCCGATTCGGATGCTAGACCCAGAAACCCAAACCCCGGCTTCTTTCCAATCCACTTTCTCTTTTCAGTTCATCAATTACAGCAGCGCAGAACAAGATGATTCTTACGGTGGTAGTGGCTTCACTTTCATCATCGTCCCTGACGAGTTCACCGTAGGAAGGCCAGGGCCATGGCTTGCCATGCTTAACGATGCTTGCCAAGATAATTACAAAGCAGTGGCGATTGAATTCGACACCAGAATGAACCCAGATTTCGGAGATCCAAACGACAACCATATTGGCATCAATCTAGGTACCATAAAATCCTCTAAAACCATCAACGTTTCTGATGTTGGAGTGAACTTTAAGGATGGTTTCGTTCACCGTGCTTGGATTACCTATGATGGTCCCGGGAAAAGAATGGACATTCGTTTAGGATCAGCAAACCAAGAAGATTACCCTTCTAAGCCAATCTTCTCAGAATCTGTGGATCTCTCACCTTTTCTGAATGAGTATATGTTCGTGGGATTCTCTGCTTCCACAGGAAACCACACCCAAATCCACAACATACTTTCCTGGAACTTCACCTCCACTTCTCAAGCTTCTCTTCGCTTTCCCTCGTCTAATACCTGCGAGGGTAACATCTTACTTCGGAGTTCCTCTGCAACTCCGAGTACTAATGGTTCATCTAAATTTGAACCTTCTCGCAGCTTTTTAATCTTTACAGGTGTAGTGGCTTTGGCTCTTGCTGTTGTTCTCGGTTTCTACTTCATTAGTATACGCAAAAGAAATCCTGAAAAATCAATCGTTCCAAGACCCCCAAATAAGCCTCGCCGCTTTTCCTTCTCTGAGATTTCCTCTGCCACTCGATCCTTCAATGAAATAGAGGTATTGGGTAGTGATTCTAGGGGTGTGTACTACTGCGGGAAGCTTCCTAACGGCATAAGAGTTGCTGTGAAAAGATTCTCATCTCAGTTTCTGAGCTCATATGGGTCAGATCATAAGAGACGGTTGTTGAAGGAAATCAAATCTATCAGCCAGTTTCGCCACCCCAATTTGATTCCCATAAGAGGTTGGTGCCCAGACAGGCAAGAAACCATGGTGGTCTATGATTTCTTCCCAAATGGCAGCCTTGACAAGTGGCTATTCGACGGCAATGTTCTTCCATGGACTCGTCGATTCAAAATCATAAAAGACGTGGCTGATGGCTTGAGCTTCCTCCACTCTAAGCAACTAGCCCACAAGAACTTGAAATGTAGCAGTGTGTTTCTTGATGTGAACTACAGAGCAATCTTGGGTGACTTTGGGTTTGTACTATTAGAATCAGAATCAAGGCAATTCGAGTCCACTGTGTGTCGAGGTGTTGATGTGTTTGAATTTGGTATATTTGTGCTGGAAGTGATAGCGGGAAGGCGCAGGGTAGAGGAAGAGAATGTAAAACCAGAAGCCAAAGACTTGCTGGATTATGCTTGGAATTTGCACGAGATTGACGAGAAAGTGAAGGTGGTGGATAGAAGAATGGGATCACTGATAAATATGGAGCAAGCAATTCGTGTCTTGGAAGTTGGACTGCTTTGCACTTTGAATGAGAACAAAGGAAGGCCATGCATGGAGCAAGTGGTAGAGTTTCTGAACATGGAAATAGCCATCCCTAAGCTTCCAAAAAATCGCCCTGTTGCCTTGTTCCCTTACAGCAGTGCCAACACAGGTCTCTGCAATACGTACTCTTGCACCACCCTGAAGTTAAGCCATGATATTAGGGACGCATTCACTGGGTAG 2022 0.4431 MASFYFIFLFCVFTLLASIGEHQVIAFSSAINVTKQFHFPDFSASNNSRILHDVKLLGSAKFSEEKGALQIPDDSSDIRHRAGRGIYSFPIRMLDPETQTPASFQSTFSFQFINYSSAEQDDSYGGSGFTFIIVPDEFTVGRPGPWLAMLNDACQDNYKAVAIEFDTRMNPDFGDPNDNHIGINLGTIKSSKTINVSDVGVNFKDGFVHRAWITYDGPGKRMDIRLGSANQEDYPSKPIFSESVDLSPFLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQASLRFPSSNTCEGNILLRSSSATPSTNGSSKFEPSRSFLIFTGVVALALAVVLGFYFISIRKRNPEKSIVPRPPNKPRRFSFSEISSATRSFNEIEVLGSDSRGVYYCGKLPNGIRVAVKRFSSQFLSSYGSDHKRRLLKEIKSISQFRHPNLIPIRGWCPDRQETMVVYDFFPNGSLDKWLFDGNVLPWTRRFKIIKDVADGLSFLHSKQLAHKNLKCSSVFLDVNYRAILGDFGFVLLESESRQFESTVCRGVDVFEFGIFVLEVIAGRRRVEEENVKPEAKDLLDYAWNLHEIDEKVKVVDRRMGSLINMEQAIRVLEVGLLCTLNENKGRPCMEQVVEFLNMEIAIPKLPKNRPVALFPYSSANTGLCNTYSCTTLKLSHDIRDAFTG 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3963g00003 673 Gene3D - 33 284 - -
Pral3963g00003 673 Pfam Legume lectin domain 35 283 IPR001220 GO:0030246
Pral3963g00003 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 280 IPR013320 -
Pral3963g00003 673 Pfam Protein tyrosine and serine/threonine kinase 377 522 IPR001245 GO:0004672|GO:0006468
Pral3963g00003 673 Gene3D Phosphorylase Kinase; domain 1 339 453 - -
Pral3963g00003 673 ProSiteProfiles Protein kinase domain profile. 373 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3963g00003 673 CDD lectin_legume_LecRK_Arcelin_ConA 36 279 IPR001220 GO:0030246
Pral3963g00003 673 SUPERFAMILY Protein kinase-like (PK-like) 346 625 IPR011009 -
Pral3963g00003 673 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 34 286 - -
Pral3963g00003 673 PANTHER - 70 628 - -
Pral3963g00003 673 Gene3D Transferase(Phosphotransferase) domain 1 454 646 - -
Pral3963g00003 673 FunFam Lectin-domain containing receptor kinase A4.2 454 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3963g00003 Pral-Chr3963 7274 10015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3963g00003 69 643 Receptor kinase-like Gene Family AT5G55830 32.623 2.31e-95 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3963g00003 Lectin_legB 5.5e-54 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3963g00003 - - gmx:100807767 969.918