Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3962g00076 ATGTCAACTTCGCCGTCTCCCGGAGCTTCTCCGGCCCCCACCTCGCCGCCGTCCACTAACACAACTTCTCCTCCTCCGCCTACTACTAACACAACATCTCCTCCTCCGCCTACTACTAACACAACATCTCCTCCTCCGCCCTCGGCCACCCCTCCTGCAACACCTCCTGCTACTCCCTCCACTCCACCACAGGTTACTCCTTCGCCCCCGCCGCCAGCCACACCCACTCCCAGCCCTCCCTTTCCCTCCCCACCTGCAACCTCGCCACCGCCGCCTACGTCTGGTACCAATTCTCCACCACCTCCGGTGACTCGCAGCTCGCCTCCTCCTCCTCCTCCTCCGTCCAGTTCAACCACGCCTTCGTCCCCTTCTTCATCGCCGGATATATCAACTGGTGTTATTGTTGGCATCGCCGTTGGTGCTGTGGGGATTCTTGTAATTTTAAGCCTTGTTTGCGTATGTTGTCGGAGGAAGAAGAGGAGAACAAGTAATGTAGGATCCTATGTGCCGCCACAGGGACCTAAAGGTGACCAATATGGTGGCCTACCACGTCAGTGGCAGCATAATGCTCCGTCTCCTTCAGATAATATTGTCTCCGTGATGCAAAAGCCCCCGCCCCCGGCTTATGCCCCTAAACCTCCTCCGCCGCCGCCATTTCTCGGCAGCAGTGGTGGGTCAGGTTCCAACTATACAGGTGGCGAAAATTCACACCCACCTCCTTCTCCTGGAATGTCATTGGGTTTCTCAAAGAGCGCATTTTCATATGAAGAGTTGGTACGGGCAACAGATGGGTTCTCCGATGCCAACCTCCTTGGACAAGGTGGATTTGGATATGTGCACAAGGGAATCCTGCCGAATGGGAAGGAGGTGGCAATCAAGCAGCTAAAGGCAGGAAGTGGGCAGGGTGAACGAGAATTTCAAGCAGAAGTTGAGATCATTAGCCGAGTTCATCACAGACATCTTGTTTCTCTCGTTGGGTACTGCATTACTGGACACCAGAGATTGCTTGTTTATGAATTTGTTCCAAACAATACGTTGGAGCTTCACTTACATGGAAAAGGGCGACCTACTATGGATTGGCCCACAAGACTGAAAATTGCATTAGGATCAGCAAAAGGACTGGCGTATCTCCATGAGGATTGTCATCCCAAGATCATCCATCGTGATATCAAAAGTGCTAACATACTTCTGGATTTCAAGTTTGAAGCGAAGGTTGCTGATTTTGGACTAGCAAAGTTTTCTTCTGATCTCAATACTCATGTTTCCACTCGAGTGATGGGAACTTTTGGTTATCTGGCTCCAGAATATGCTTCCAGTGGGAAACTCACAGACAAATCAGATGTTTTCTCCTTTGGGGTGATGCTCCTGGAGCTAATTACTGGACGTCGACCGGTTGACACAACTCATACTTTCATGGAGGATAGTCTGGTAGAGTGGGCAAGGCCTTTGCTTATCCGTGCTTTGGAAGAGCATGATTTTGATTCTCTGGTTGATCCAAGGCTGAAAGATGAATATGACCTCAATGAAATGACTCGCATGGTCGCATGTGCTGCAGCCTGCACCCGTCATTCAGCACGTCATAGGCCAAAAGTGAGCCAGGTTGCTCGTGCTCTGGAAGGAGACATGTCTCTATCAGATCTGAACGAAGGAATTAAACCCGGACACAGCTCTGCCTACAGTTTCCGAGGAAGCTCTGATTATGATACTGCACAATACAAGGAAGACATGAAAAAATTCAGGAAAATGGCTTTGGGAACCCAGGAGCTTGGCGTCAGCAGTGAATACAGTGCACCTACGAGTGACAACAGCTTATACCCATCTGGCTCAAGCAGCGAAGGCCAGAGCCGCGGGACCACCCGGGAAATGGAAATGAGAAAGATGAATAACCACCAAGGTTACAGTGGAAGCTCTTGA 1914 0.5068 MSTSPSPGASPAPTSPPSTNTTSPPPPTTNTTSPPPPTTNTTSPPPPSATPPATPPATPSTPPQVTPSPPPPATPTPSPPFPSPPATSPPPPTSGTNSPPPPVTRSSPPPPPPPSSSTTPSSPSSSPDISTGVIVGIAVGAVGILVILSLVCVCCRRKKRRTSNVGSYVPPQGPKGDQYGGLPRQWQHNAPSPSDNIVSVMQKPPPPAYAPKPPPPPPFLGSSGGSGSNYTGGENSHPPPSPGMSLGFSKSAFSYEELVRATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGHQRLLVYEFVPNNTLELHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKSANILLDFKFEAKVADFGLAKFSSDLNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDTTHTFMEDSLVEWARPLLIRALEEHDFDSLVDPRLKDEYDLNEMTRMVACAAACTRHSARHRPKVSQVARALEGDMSLSDLNEGIKPGHSSAYSFRGSSDYDTAQYKEDMKKFRKMALGTQELGVSSEYSAPTSDNSLYPSGSSSEGQSRGTTREMEMRKMNNHQGYSGSS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3962g00076 637 MobiDBLite consensus disorder prediction 1 128 - -
Pral3962g00076 637 MobiDBLite consensus disorder prediction 591 617 - -
Pral3962g00076 637 MobiDBLite consensus disorder prediction 591 637 - -
Pral3962g00076 637 MobiDBLite consensus disorder prediction 9 120 - -
Pral3962g00076 637 FunFam proline-rich receptor-like protein kinase PERK1 243 340 - -
Pral3962g00076 637 ProSiteProfiles Protein kinase domain profile. 265 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3962g00076 637 Pfam Protein tyrosine and serine/threonine kinase 270 537 IPR001245 GO:0004672|GO:0006468
Pral3962g00076 637 Gene3D Phosphorylase Kinase; domain 1 243 340 - -
Pral3962g00076 637 FunFam Proline-rich receptor-like protein kinase PERK1 341 549 - -
Pral3962g00076 637 MobiDBLite consensus disorder prediction 185 199 - -
Pral3962g00076 637 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Pral3962g00076 637 MobiDBLite consensus disorder prediction 204 221 - -
Pral3962g00076 637 MobiDBLite consensus disorder prediction 162 245 - -
Pral3962g00076 637 MobiDBLite consensus disorder prediction 222 238 - -
Pral3962g00076 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Pral3962g00076 637 Gene3D Transferase(Phosphotransferase) domain 1 341 549 - -
Pral3962g00076 637 PRINTS Proline rich extensin signature 35 47 - -
Pral3962g00076 637 PRINTS Proline rich extensin signature 51 72 - -
Pral3962g00076 637 PRINTS Proline rich extensin signature 10 26 - -
Pral3962g00076 637 SUPERFAMILY Protein kinase-like (PK-like) 238 538 IPR011009 -
Pral3962g00076 637 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 143 598 IPR047117 -
Pral3962g00076 637 SMART serkin_6 265 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3962g00076 Pral-Chr3962 534549 538830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3962g00076 106 620 Trihelix Transcription Factor Family AT1G70460 50.965 1.89e-167 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral3962g00076 PK_Tyr_Ser-Thr 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3962g00076 - - gmx:100781944 785.408