Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3962g00053 ATGGGAGAAGGTGACGGGAGTGATTGCCCTCCGAAGAATGTGTTACTGGATTCTGCTGCAGCAGCCTTGCCGTTGGATGGTCCAGGAAAGAAGCTAGCAAGGCAGCTCGATTTTACGGGTTTTGGTGGGGTATCGGGTACTGTGGCGTCAAGCGAACACCTTCAATTGCAACTGCCTCAGTCACGTTCACAGTCACTGCCTCAGGGACTGACCCAACAAACCATGGTTGTGATGCCAGTGCCGCCGCAGGGACCTCATTCTTCAGTGAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGACCTAACCTTGAAATGAAAGACTCTACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACACTCAAGATGCTTAAAGTTATACTGCGAATGTTTTGCATCAGGAATATACTGTGAGGGGTGCAACTGTGTAAATTGTTTTAACAATGTTGAGAATGATGCGGTGAGACGGGAGGCTGTTGAAGCTACTTTAGAGCGCAATCCTAATGCATTTAGGCCAAAAATTGCAAGCAGCCCTCATGGAACACGTAATAGCAGGGAGGAGACTGGAGAAGTTTTACTATTGGGAAAGCACAACAAGGGCTGCCACTGTAAAAAGTCGGGATGCCTCAAGAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGCTCCGAAAATTGCAAATGCTTGGACTGCAAAAATTTTGAGGGAAGTGAAGAAAGACAAGCTTTATTCCATGGAGATCAAAATAACAATATAGCATATATGCAGCAGGCAGCAAATGCTGCCATAACTGGGGCTATCGGATCCTCTGGTTATTCATCCCCTCCAGTATCCAAGAAAAGAAAAGGTCAGGAGCACTTTTTTGGGCCAACAGTCAAGGACTCATCTGTTGGCAGACTTGGGCAGTTTCAACAGGCAAACAATGCCGGAGTTCCTGAACCTTCCTCTTCCTTATCCCCTCTCCCTGGTGCTCGGGTTGGGAGTGCTGCAGCAGGTCCTTCAAAATTTGCATACAGGTCTCTTTTAGCAGACATAATACAGCCTCAACACTTGAAGGAACTTTGCTCTATTCTGGTGCTAGTGTCAGGACAAGCCGCGAAGACACTCTCAGGACCAGATCAGAAAAATTTAGTTGACAAGCAGCGAATTGAAAATCAGACGGAGAGTGCCCTTGCTTCATCAACTCAACAGCAATTACCTAATCGAGTGGAAACTGACGTCGAGAAAACCATGGCTAATGATTGTTTGAGTGCAAACCAGACGGATAAAATCGGCGGCCAAGGTGATTCCAGTTCAGATGGTGCTCATGTCTCAAAGGGGAGGCCAATGTCTCCTGGAACTCTAGCCTTGATGTGCGATGAGCAAGATGCAATGTTCATGACAGCTCCCCCTCCTAGTGGTTTGATTGCCCATGCCGACAACACATCTTCACAGTCTGGTTGTGGACAAGGCATGACAGAGGCCCATGCAGAGCAAGAAAGGGCTGTATTGACAAAGTTCAGAGATTTTCTAAATAGGGTTATCACCATGGGAGAAATAAATGAGACAAAGTGTTCTTCATTAGCTAGAAGTGTATGGGAGACTCAAAAGGAGACAGTCAGCAATAATGTCGGAAATACAAGTACTAAGACAACACATCAGCAGGTTGTCACTAGTAATGGTGTTGCCAAAGCTGCGGTCCCACCCATGGCCGCAAGTATGAACATAATCACTTCAACGGCTTTAATTCCTAATAATGTGATTCCTGAAAATGGGGAAAGTAAGCCAAAGATCGAAAAGGAGGTATGA 1794 0.4588 MGEGDGSDCPPKNVLLDSAAAALPLDGPGKKLARQLDFTGFGGVSGTVASSEHLQLQLPQSRSQSLPQGLTQQTMVVMPVPPQGPHSSVRVGKPESPKSRSRPNLEMKDSTPKKQKQCNCKHSRCLKLYCECFASGIYCEGCNCVNCFNNVENDAVRREAVEATLERNPNAFRPKIASSPHGTRNSREETGEVLLLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFEGSEERQALFHGDQNNNIAYMQQAANAAITGAIGSSGYSSPPVSKKRKGQEHFFGPTVKDSSVGRLGQFQQANNAGVPEPSSSLSPLPGARVGSAAAGPSKFAYRSLLADIIQPQHLKELCSILVLVSGQAAKTLSGPDQKNLVDKQRIENQTESALASSTQQQLPNRVETDVEKTMANDCLSANQTDKIGGQGDSSSDGAHVSKGRPMSPGTLALMCDEQDAMFMTAPPPSGLIAHADNTSSQSGCGQGMTEAHAEQERAVLTKFRDFLNRVITMGEINETKCSSLARSVWETQKETVSNNVGNTSTKTTHQQVVTSNGVAKAAVPPMAASMNIITSTALIPNNVIPENGESKPKIEKEV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3962g00053 597 MobiDBLite consensus disorder prediction 420 444 - -
Pral3962g00053 597 ProSiteProfiles CRC domain profile. 114 238 IPR005172 -
Pral3962g00053 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 201 235 IPR005172 -
Pral3962g00053 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 115 150 IPR005172 -
Pral3962g00053 597 PANTHER TESMIN/TSO1-RELATED 59 515 IPR028307 -
Pral3962g00053 597 MobiDBLite consensus disorder prediction 275 328 - -
Pral3962g00053 597 SMART CXC_2 113 153 IPR033467 -
Pral3962g00053 597 SMART CXC_2 198 239 IPR033467 -
Pral3962g00053 597 MobiDBLite consensus disorder prediction 420 436 - -
Pral3962g00053 597 MobiDBLite consensus disorder prediction 299 317 - -
Pral3962g00053 597 MobiDBLite consensus disorder prediction 93 115 - -
Pral3962g00053 597 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3962g00053 Pral-Chr3962 465825 474380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3962g00053 1 564 CPP Transcription Factor Family AT4G29000 54.377 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pral3962g00053 TCR 3.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3962g00053 - - qsa:O6P43_007909 844.343