Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3962g00050 ATGGCGGACATGGACCCTCCTCCCAAGAGCTGGAGCATCTACAGCCGAGCTGAGATTGTCGCCAAGTACGAGGTCATGGAGCGGGTCGGCTCTGGAGCTTACTCCGACGTCTACAAAGGCCGCCGTCTCTCCGATGACCTCATCGTCGCCCTTAAAGAAGTTCACGATTATCAATCTGCTATGCGAGAAATCGAGGCCTTGCAGATCCTCCAGGGGTCCCCTAATGTCGTCGCCTTGCACGAGTACTTCTGGCGCGAGGACGAGGACGCCGTCCTCGTTCTCGAGTTTTTGAGAACTGACTTGTTGACAGTCATCAAAGAGGCCAAGAAGGAGGGTGTGGGTCTAAGCGTTGGGGAGATGAAGCAGTGGATGATCCAGATTCTTTGCGGCGTCGATGCGTGCCACGCAAATATGATCATGCATCGAGATTTGAAGCCAAGTAATTTGTTGATTTCGGAGGATGGCGTCCTGAAGTTGGCTGATTTTGGCCAGGCAAGGATACTTATGGAGCCTGGATTTCATGCTATGGATGAAAACCCACCACCTTATGAAGACGATATTTCAAATCGTGAGAGATCTCCTCAACATCCTGAATTATTTATTCAGACACACAACCAAAACCAAGAAGGCTATGGAAATCAAGAACAGGGAACTGTAACTCAAGATGAATATTTTAGAGTATTAGAAGAGATAAAAACTAAGGGCTCCACAGATGACATGGACAAGGATACGAACTTCCAAGATGGAAATACATCTTGTCTTGCAACTTGCACAATAAGTGACACAGAAGATGATTTTATGAAGGGTTCGTTTACCTATGAAGCAGATGTCAGAGACAATGAAGAAGGTGGTCTCACATCATGCGTCGGAACCCGATGGTACAGGGCTCCTGAACTGCTATATGGATCAGTTGACTATGGGTTAGAGATTGATCTCTGGTCAATGGGCTGCATCTTTGCAGAGCTCCTAACTCTGGAGCCCTTATTTCGTGGGACAGGTGATATTGATCAGCTTAGCAGAATTATTGACGTTTTAGGCAACCTCAATGAGGAAGTTTGGTCTGGTTGTTCCAAGCTTCCTGATTACGATAAAATCTCGTTCACTAAGGTGGAGAACCCTCCAGGTCTTGAAGGCTGCCTGCCCAACCGTTCCCCTGATGAAGTCTCTCTTGTGAAGAAACTGGTTTGTTATGACCCGGCTAGAAGAGCTACAGCAATGGAGCTTCTCCAAGACAAGTATTTTGGTGAAGACCCTCTTCCTGTACCTATTTCCGAGCTGCGGGTTCCTTTGACAAGAACTGCACACGATGAAGACTCTCCTGATAGGTGTTTTGAACCCAATGATATGGGTTTTTCTGATTTTGAGGACTTTAACTCCGTGAAAGTCATCACAACTGGTTCTGGTTTCTCTATCCAATTTCCCTGA 1425 0.4681 MADMDPPPKSWSIYSRAEIVAKYEVMERVGSGAYSDVYKGRRLSDDLIVALKEVHDYQSAMREIEALQILQGSPNVVALHEYFWREDEDAVLVLEFLRTDLLTVIKEAKKEGVGLSVGEMKQWMIQILCGVDACHANMIMHRDLKPSNLLISEDGVLKLADFGQARILMEPGFHAMDENPPPYEDDISNRERSPQHPELFIQTHNQNQEGYGNQEQGTVTQDEYFRVLEEIKTKGSTDDMDKDTNFQDGNTSCLATCTISDTEDDFMKGSFTYEADVRDNEEGGLTSCVGTRWYRAPELLYGSVDYGLEIDLWSMGCIFAELLTLEPLFRGTGDIDQLSRIIDVLGNLNEEVWSGCSKLPDYDKISFTKVENPPGLEGCLPNRSPDEVSLVKKLVCYDPARRATAMELLQDKYFGEDPLPVPISELRVPLTRTAHDEDSPDRCFEPNDMGFSDFEDFNSVKVITTGSGFSIQFP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3962g00050 474 Pfam Protein kinase domain 23 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3962g00050 474 Pfam Protein kinase domain 282 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3962g00050 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Pral3962g00050 474 SUPERFAMILY Protein kinase-like (PK-like) 8 436 IPR011009 -
Pral3962g00050 474 SMART serkin_6 23 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3962g00050 474 PANTHER CELL DIVISION PROTEIN KINASE 21 420 - -
Pral3962g00050 474 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Pral3962g00050 474 Gene3D Transferase(Phosphotransferase) domain 1 15 209 - -
Pral3962g00050 474 ProSiteProfiles Protein kinase domain profile. 23 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3962g00050 474 FunFam Cyclin-dependent kinase F-1 14 108 - -
Pral3962g00050 474 Gene3D Transferase(Phosphotransferase) domain 1 248 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3962g00050 Pral-Chr3962 450778 453079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3962g00050 7 474 Core Cell Cycle Gene Families AT4G28980 61.765 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Pral3962g00050 Pkinase 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3962g00050 - - pcin:129306938 845.499