Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3962g00046 ATGAATAGAGGTCATCTTCTTCATCAGAGCTCACCGGTGCAGCAAATGATGGCCAATCCTAACTGGTGGAACATCAATATTAACACCATGCGACCTCAACAACCTTCTCCTTTCTTGTCCTCTCCCTCCAATTTTCTACCCAATCATCAGCAACTTCCTTCTTGGCAACATGACCTCAACAATCAACAACAGTTTCCTGACTCATGGACCCAACTTCTCATGGCTGGATCGGTGGCTGAAGAAGATAGAGGAGGTATGGGTCAGTTTCAGGCACCGAATGCTGCTCTCGTGGATATTAAGCAAGAAAGTTCAGTGAACAGCTATGGCTATGGACATGGAAGCAGCGAAGAATTTCAAGCAGTGAAACCTGCAGGTTGGCCTCAAATGGTAGTACCAGCTTCTTCCCCGAAGTCCTGTGTCACAAGTTTCAGCAGCAATATGTTGGATTTCTCTAACAATCAAACCGATGCTAAGCCGTCTCTGCCAGATCCATCTTCTGAGTGCAACAGCAGTGCAAGTGGTGGGGCAGTGAAGAAGGCTAGGGTTCAAGCTTCCTCTGGAGCTCAGTCCACCTTCAAGGTTAGGAAGGAGAAGCTGGGTGACAGAATCACAGCCCTTCATCAGCTAGTTTCTCCATTTGGGAAGACTGACACAGCGTCTGTGCTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAGATCGAGGCTCTCAGCTTACCATACTTGGGCAATACTGCTTCATCAAACATCAGGCACCAACAACAACAATCTGCAGTTCAAGGAGAGAATAATTGTATATTCCCTGAAGACCCTGGTCAGCTTCTGCATGAAAACAGCTTGAAGAGGAAAGCGCCTGGCAGTAATCAGCAGGAATCAAGAGAAGAAAGGAAGAAGGACCTGAGAAGTAGAGGGTTGTGTCTGGTTCCAGTGTCGTGCACAATGCAAGTTGGGAGTGACAATGGAGCAGACTATTGGGCTCCTGCACTAGGCGCAGGGTTTCGATAG 1011 0.4748 MNRGHLLHQSSPVQQMMANPNWWNININTMRPQQPSPFLSSPSNFLPNHQQLPSWQHDLNNQQQFPDSWTQLLMAGSVAEEDRGGMGQFQAPNAALVDIKQESSVNSYGYGHGSSEEFQAVKPAGWPQMVVPASSPKSCVTSFSSNMLDFSNNQTDAKPSLPDPSSECNSSASGGAVKKARVQASSGAQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGNTASSNIRHQQQQSAVQGENNCIFPEDPGQLLHENSLKRKAPGSNQQESREERKKDLRSRGLCLVPVSCTMQVGSDNGADYWAPALGAGFR 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3962g00046 336 MobiDBLite consensus disorder prediction 151 173 - -
Pral3962g00046 336 CDD bHLH_AtbHLH_like 191 240 IPR045239 -
Pral3962g00046 336 FunFam transcription factor bHLH68 isoform X1 190 243 - -
Pral3962g00046 336 Gene3D - 190 262 IPR036638 GO:0046983
Pral3962g00046 336 MobiDBLite consensus disorder prediction 281 302 - -
Pral3962g00046 336 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 318 - -
Pral3962g00046 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 183 232 IPR011598 GO:0046983
Pral3962g00046 336 MobiDBLite consensus disorder prediction 151 182 - -
Pral3962g00046 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 243 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3962g00046 Pral-Chr3962 414817 418742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3962g00046 170 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 53.103 1.70e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3962g00046 - - gmx:100785156 452.21