Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3962g00036 ATGGGTTGTGTATATTCAAGGGTTTGCATAGGTGAGGTTTGTAGTCCAAGAAATTCCAGGATAAATGAAGGTCGAAATGCGAAAACCGGTGAGGCTGCCTGGTTGTCTCCTGCATCCTCGGATGTTCAGGAAGGTGAAGTTAGAGACCAATTGAATCAATTGAGCTTAACCAGAGACTCTGAAGCGGGCATCAGAAGGCTAGCTAGGGTTTCAGCGCAGTTCCTACCTCCCGATGGCTCGCGAGCAGTGAAGGTCCCTTCGGGGAACTTTGAATTGCGTTATTCGTACTTGTCGCAGAGAGGTTATTACCCTGATGCGCTCGATAAGGCCAACCAAGACAGTTTTTGCATTCACACCCCGTTTGGTACAGACCCTGATGATCATTTTTTTGGGGTTTTCGATGGGCATGGAGAGTTTGGGACTCAGTGTTCACAGTTCGTGAAGCGAAAGTTATGTGAAAATTTGCTTAGAAATAGTAAATTTCGGGCAGATGCTGTGGAAGCCTGTCATGCTGCGTTTTTGGCCACAAACTCGCAGTTGCATGCTGATGTTTTGGATGATAGCATGAGTGGTACCACAGCAATTACGGTTTTGGTTCGGGGTAGGACTATATACGTAGCCAATTCAGGTGATTCTAGGGCGGTGATCGCAGAGAAGAGAGGAAAAGATATCGTGGCAGTAGACTTATCCATGGACCAAACACCTTTTAGGTCAGATGAACTCGAGAGGGTCAAGCTTTGTGGAGCTAGAGTTCTTACTCTGGATCAGATTGAAGGTCTTAAGAATCCTAATGTTCAATGTTGGGGAACAGAAGAAGGAGATGATGGTGACCCGCCTAGATTGTGGGTGCCGAACGGGATGTACCCTGGCACAGCTTTCACTAGAAGCATTGGTGATTCAATTGCCGAGACCATTGGGGTCGTTGCTACCCCGGAAATTGTTGTCTTCGAGCTTACTCCAAAGCATCCTTTCTTTGTGCTTGCCAGCGACGGTGTCTTTGAGTTTCTATCTAGCCAGGCTGTTGTTGAGATGGTTGCTAAATTCAAAGATCCTCGTGATGCTTGTGCTGCGATTGTGGCTGAATCTTATCGACTATGGCTACAGTATGAAACTCGTACGGATGATATCACCATTATTGTTATTCATATTAATGGACTAGCCGATCCTGCTGTTGGTCAATCTGCCAGTTATGGTGATATTCCTAGAACTCCAGTTCCTCAGGTTGTTGAGGTGACAGCATCAGAATCACCTTCCACCCTGAGCTGGAACTCCAAGAACCCTCGGGCAAGGCATGACTTATCAAGGGCGCGTATCCGAGCAATTGAAAACTCCTTAGAAAATGGACAAACTTGGGTTCCTCCCTCTTCAGCTCATAGGAAAACATGGGAGGAAGAAGCACACATTGAGCGGGCATTGCATGATCATTTTCTCTTCAGAAAGCTTACTGACTCCCAGCGTCATGTTTTATTGGATTGCATGCAAAGAATTGAAGTTCAACCTGGAGATGTTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTCTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAGGAAGAAAGTGGGGAAGTGCCTAGGGTTTTGCAGCGCTACACAGCAGAAAAATTGTCTTGTTTTGGAGAACTTGCTCTAATGTATAATAAACCACTTCAGGCCTCTGTACGTGCTGTAACAGAAGGAACTCTGTGGTCCTTAAGGCGAGAAGACTTTCGAGGAATTTTAATGTCAAAATTCTCTAACTTATCATCATTGAAGTTGCTTCGGTCTGTAGACCTCCTTTCAAAGTTGACAATCTTGCAACTCAGTCAGATCTTGGAGTCCCTTTCTGAAGTTTCCTTCTCAAATGGTCAAACAATAATTGATGAGAATGAAGCTGCTGCGTTGTACATAATTCAGAAGGGACAAGTGAGAATAACTTTTGATTCAGATTTACTGAGAAACCCAAATGCCTGCAGCCTGAAGCCTGACAATCAGAATGAGAATGATCTCCAGAGCACGAAGGAGCTATCAATAGAGAAGCCTGAGGGGAGTTATTTTGGTGAATGGACTCTTCTTGGTGAAAATATTGGAACCTTTAGGGCTATTGCTGTCGGTGACGTGTTATGTACCGTACTAACGAAGGAAAAATTTGAATCAGACATTGGCCCCTTGAAATTGTTTTCTCAGGAAGATCAGAAGTCAAGGGACAGTTCCTCAGACTATTTGAAGGAATCAACTAAAAGTCTTAATTTTTCTTCCCCTGATAAAATCCATCTCTCAGATTTGGGGTGGAAAAAGTGTGTATATTCTACTGACTGTTCTGAGGTTGGGCTTACTCTATTAGGAGACTCAGAAAATGTGCTTACTTTGAAGAGGTTTTCTAAGCAAAAGGTGAAAATGCTGGGAAAGGAAGCACAAGTTTTCAAAGAGAAAGCTTTGATCAAAGGCATGAACTCTTCGGCTTGTATACCACAAGTTGTGTGCACCTGTGCTGATCGAGCATATGCTGGGATACTATTAAATACATGCCTTGCCTGTCCATTGTCTTCCATACTTACAAGTCCTTTTGGTGAATCATCTGCACGATTTTGTGCTGCTTGTGTTGTTACCGCCTTGGAAGATTTACACAAGAATGGTGTTCTTTACAGAGGGGTATCACCTCGTCTTCTGACTTTGGACCAAACTGGATATATACAGCTAGTGGACTTCAGGTTTGGGAAGAAGCTCTCAGATGAAAGAACGTTCACAATTTGTGGAATGGCAGACTCCTTGGCTCCGGAGATTGTTCTTGGAAAAGGCCATGGCTTCCCTGCTGACTGGTGGGCTTTGGGAGTTCTTATTTATTTTATGTTACGGGGTGAGATGCCTTTCGGATCGTGGAGAGAAAATGAACTTGATACGGTGGCCAAAATCGCAAAACGGAAGCTAAACCTTCCAGAAACTTTCAGCCCAGAGGCTGTTGATCTCATCACTAAGTTACTTGATGGTGACGAAAGCACCAGACTTGGTAGCCACGGTCCTGATTCAGTCAAAAGCCATCCTTGGTTTAGTGGCGTTGACTGGGAAGGGATAAGAAGCCATAGCTTTCCTGCTCCTCCAGAAATTATCTCCCGTATTAGTCAATACATGGAAATTCATTCTGAGGATTGCACTGGTTCCCAAGTTTCCCCCTCACAGGAGGTAGATGAACTTAACATTCCTGAATGGCTTGAGGACTGGTAG 3234 0.4443 MGCVYSRVCIGEVCSPRNSRINEGRNAKTGEAAWLSPASSDVQEGEVRDQLNQLSLTRDSEAGIRRLARVSAQFLPPDGSRAVKVPSGNFELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTDPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSKFRADAVEACHAAFLATNSQLHADVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAEKRGKDIVAVDLSMDQTPFRSDELERVKLCGARVLTLDQIEGLKNPNVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVFELTPKHPFFVLASDGVFEFLSSQAVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITIIVIHINGLADPAVGQSASYGDIPRTPVPQVVEVTASESPSTLSWNSKNPRARHDLSRARIRAIENSLENGQTWVPPSSAHRKTWEEEAHIERALHDHFLFRKLTDSQRHVLLDCMQRIEVQPGDVIVKQGGEGDCFYVVGSGEFEVLATQEEESGEVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTEGTLWSLRREDFRGILMSKFSNLSSLKLLRSVDLLSKLTILQLSQILESLSEVSFSNGQTIIDENEAAALYIIQKGQVRITFDSDLLRNPNACSLKPDNQNENDLQSTKELSIEKPEGSYFGEWTLLGENIGTFRAIAVGDVLCTVLTKEKFESDIGPLKLFSQEDQKSRDSSSDYLKESTKSLNFSSPDKIHLSDLGWKKCVYSTDCSEVGLTLLGDSENVLTLKRFSKQKVKMLGKEAQVFKEKALIKGMNSSACIPQVVCTCADRAYAGILLNTCLACPLSSILTSPFGESSARFCAACVVTALEDLHKNGVLYRGVSPRLLTLDQTGYIQLVDFRFGKKLSDERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLNLPETFSPEAVDLITKLLDGDESTRLGSHGPDSVKSHPWFSGVDWEGIRSHSFPAPPEIISRISQYMEIHSEDCTGSQVSPSQEVDELNIPEWLEDW 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3962g00036 1077 SUPERFAMILY cAMP-binding domain-like 458 587 IPR018490 -
Pral3962g00036 1077 SMART PP2C_4 83 381 IPR001932 -
Pral3962g00036 1077 SUPERFAMILY Protein kinase-like (PK-like) 770 1055 IPR011009 -
Pral3962g00036 1077 Gene3D Jelly Rolls 593 742 IPR014710 -
Pral3962g00036 1077 Gene3D Jelly Rolls 450 592 IPR014710 -
Pral3962g00036 1077 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Pral3962g00036 1077 SMART cnmp_10 477 600 IPR000595 -
Pral3962g00036 1077 SMART cnmp_10 603 740 IPR000595 -
Pral3962g00036 1077 ProSiteProfiles cAMP/cGMP binding motif profile. 477 586 IPR000595 -
Pral3962g00036 1077 SUPERFAMILY cAMP-binding domain-like 596 726 IPR018490 -
Pral3962g00036 1077 Pfam Protein phosphatase 2C 122 362 IPR001932 -
Pral3962g00036 1077 CDD PP2Cc 109 383 IPR001932 -
Pral3962g00036 1077 Pfam Protein kinase domain 786 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3962g00036 1077 Gene3D Transferase(Phosphotransferase) domain 1 851 1036 - -
Pral3962g00036 1077 ProSiteProfiles Protein kinase domain profile. 755 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3962g00036 1077 ProSiteProfiles cAMP/cGMP binding motif profile. 603 727 IPR000595 -
Pral3962g00036 1077 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Pral3962g00036 1077 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Pral3962g00036 1077 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Pral3962g00036 1077 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Pral3962g00036 1077 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 451 591 - -
Pral3962g00036 1077 CDD CAP_ED 603 722 IPR000595 -
Pral3962g00036 1077 Gene3D Phosphorylase Kinase; domain 1 775 850 - -
Pral3962g00036 1077 SUPERFAMILY PP2C-like 82 385 IPR036457 -
Pral3962g00036 1077 SMART serkin_6 773 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3962g00036 1077 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 457 1039 - -
Pral3962g00036 1077 Pfam Cyclic nucleotide-binding domain 496 587 IPR000595 -
Pral3962g00036 1077 Pfam Cyclic nucleotide-binding domain 622 722 IPR000595 -
Pral3962g00036 1077 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 88 385 - -
Pral3962g00036 1077 Gene3D - 87 384 IPR036457 -
Pral3962g00036 1077 CDD CAP_ED 477 586 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3962g00036 Pral-Chr3962 274403 282335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3962g00036 1 1077 PP2C-type Phosphatase Gene Family AT2G20050 67.609 0.0 1484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Pral3962g00036 Pkinase 4.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3962g00036 - - gmx:100799821 1803.88