Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3962g00035 ATGGGTTGTGTATATTCAAGGGTTTGCATAGGTGAGGTTTGTAGTCCAAGAAATTCCAGGATAAATGAAGGTCGAAATGCGAAAACCGGTGAGGCTGCCTGGTTGTCTCCTGCATCCTCGGATGTTCAGGAAGGTGAAGTTAGAGACCAATTGAATCAATTGAGCTTAACCAGAGACTCTGAAGCGGGCATCAGAAGGCTAGCTAGGGTTTCAGCGCAGTTCCTACCTCCCGATGGCTCGCGAGCAGTGAAGGTCCCTTCGGGGAACTTTGAATTGCGTTATTCGTACTTGTCGCAGAGAGGTTATTACCCTGATGCGCTCGATAAGGCCAACCAAGACAGTTTTTGCATTCACACCCCGTTTGGTACAGACCCTGATGATCATTTTTTTGGGGTTTTCGATGGGCATGGAGAGTTTGGGACTCAGTGTTCACAGTTCGTGAAGCGAAAGTTATGTGAAAATTTGCTTAGAAATAGTAAATTTCGGGCAGATGCTGTGGAAGCCTGTCATGCTGCGTTTTTGGCCACAAACTCGCAGTTGCATGCTGATGTTTTGGATGATAGCATGAGTGGTACCACAGCAATTACGGTTTTGGTTCGGGGTAGGACTATATACGTAGCCAATTCAGGTGATTCTAGGGCGGTGATCGCAGAGAAGAGAGGAAAAGATATCGTGGCAGTAGACTTATCCATGGACCAAACACCTTTTAGGTCAGATGAACTCGAGAGGGTCAAGCTTTGTGGAGCTAGAGTTCTTACTCTGGATCAGATTGAAGGTCTTAAGAATCCTAATGTTCAATGTTGGGGAACAGAAGAAGGAGATGATGGTGACCCGCCTAGATTGTGGGTGCCGAACGGGATGTACCCTGGCACAGCTTTCACTAGAAGCATTGGTGATTCAATTGCCGAGACCATTGGGGTCGTTGCTACCCCGGAAATTGTTGTCTTCGAGCTTACTCCAAAGCATCCTTTCTTTGTGCTTGCCAGCGACGGTGTCTTTGAGTTTCTATCTAGCCAGGCTGTTGTTGAGATGGTTGCTAAATTCAAAGATCCTCGTGATGCTTGTGCTGCGATTGTGGCTGAATCTTATCGACTATGGCTACAGTATGAAACTCGTACGGATGATATCACCATTATTGTTATTCATATTAATGGACTAGCCGATCCTGCTGTTGGTCAATCTGCCAGTTATGGTGATATTCCTAGAACTCCAGTTCCTCAGGTTGTTGAGGTGACAGCATCAGAATCACCTTCCACCCTGAGCTGGAACTCCAAGAACCCTCGGGCAAGGCATGACTTATCAAGGGCGCGTATCCGAGCAATTGAAAACTCCTTAGAAAATGGACAAACTTGGGTTCCTCCCTCTTCAGCTCATAGGAAAACATGGGAGGAAGAAGCACACATTGAGCGGGCATTGCATGATCATTTTCTCTTCAGAAAGCTTACTGACTCCCAGCGTCATGTTTTATTGGATTGCATGCAAAGAATTGAAGTTCAACCTGGAGATGTTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTCTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAGGAAGAAAGTGGGGAAGTGCCTAGGGTTTTGCAGCGCTACACAGCAGAAAAATTGTCTTGTTTTGGAGAACTTGCTCTAATGTATAATAAACCACTTCAGGCCTCTGTACGTGCTGTAACAGAAGGAACTCTGTGGTCCTTAAGGCGAGAAGACTTTCGAGGAATTTTAATGTCAAAATTCTCTAACTTATCATCATTGAAGTTGCTTCGGTCTGTAGACCTCCTTTCAAAGTTGACAATCTTGCAACTCAGTCAGATCTTGGAGTCCCTTTCTGAAGTTTCCTTCTCAAATGGTCAAACAATAATTGATGAGAATGAAGCTGCTGCGTTGTACATAATTCAGAAGGGACAAGTGAGAATAACTTTTGATTCAGATTTACTGAGAAACCCAAATGCCTGCAGCCTGAAGCCTGACAATCAGAATGAGAATGATCTCCAGAGCACGAAGGAGCTATCAATAGAGAAGCCTGAGGGGAGTTATTTTGGTGAATGGACTCTTCTTGGTGAAAATATTGGAACCTTTAGGGCTATTGCTGTCGGTGACGTGTTATGTACCGTACTAACGAAGGAAAAATTTGAATCAGACATTGGCCCCTTGAAATTGTTTTCTCAGGAAGATCAGAAGTCAAGGGACAGTTCCTCAGACTATTTGAAGGAATCAACTAAAAGTCTTAATTTTTCTTCCCCTGATAAAATCCATCTCTCAGATTTGGGGTGGAAAAAGTGTGTATATTCTACTGACTGTTCTGAGGTTGGGCTTACTCTATTAGGAGACTCAGCAGAAAATGTGCTTACTTTGAAGAGGTTTTCTAAGCAAAAGGTGAAAATGCTGGGAAAGGAAGCACAAGTTTTCAAAGAGAAAGCTTTGATCAAAGGCATGAACTCTTCGGCTTGTATACCACAAGTTGTGTGCACCTGTGCTGATCGAGCATATGCTGGGATACTATTAAATACATGCCTTGCCTGTCCATTGTCTTCCATACTTACAAGTCCTTTTGGTGAATCATCTGCACGATTTTGTGCTGCTTGTGTTGTTACCGCCTTGGAAGATTTACACAAGAATGGTGTTCTTTACAGAGGGGTATCACCTCGTCTTCTGACTTTGGACCAAACTGGATATATACAGCTAGTGGACTTCAGGTTTGGGAAGAAGCTCTCAGATGAAAGAACGTTCACAATTTGTGGAATGGCAGACTCCTTGGCTCCGGAGATTGTTCTTGGAAAAGGCCATGGCTTCCCTGCTGACTGGTGGGCTTTGGGAGTTCTTATTTATTTTATGTTACGGGGTGAGATGCCTTTCGGATCGTGGAGAGAAAATGAACTTGATACGGTGGCCAAAATCGCAAAACGGAAGCTAAACCTTCCAGAAACTTTCAGCCCAGAGGCTGTTGATCTCATCACTAAGTTACTTGATGGTGACGAAAGCACCAGACTTGGTAGCCACGGTCCTGATTCAGTCAAAAGCCATCCTTGGTTTAGTGGCGTTGACTGGGAAGGGATAAGAAGCCATAGCTTTCCTGCTCCTCCAGAAATTATCTCCCGTATTAGTCAATACATGGAAATTCATTCTGAGGATTGCACTGGTTCCCAAGTTTCCCCCTCACAGGAGGTAGATGAACTTAACATTCCTGAATGGCTTGAGGACTGGTAG 3237 0.4445 MGCVYSRVCIGEVCSPRNSRINEGRNAKTGEAAWLSPASSDVQEGEVRDQLNQLSLTRDSEAGIRRLARVSAQFLPPDGSRAVKVPSGNFELRYSYLSQRGYYPDALDKANQDSFCIHTPFGTDPDDHFFGVFDGHGEFGTQCSQFVKRKLCENLLRNSKFRADAVEACHAAFLATNSQLHADVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAEKRGKDIVAVDLSMDQTPFRSDELERVKLCGARVLTLDQIEGLKNPNVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVATPEIVVFELTPKHPFFVLASDGVFEFLSSQAVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITIIVIHINGLADPAVGQSASYGDIPRTPVPQVVEVTASESPSTLSWNSKNPRARHDLSRARIRAIENSLENGQTWVPPSSAHRKTWEEEAHIERALHDHFLFRKLTDSQRHVLLDCMQRIEVQPGDVIVKQGGEGDCFYVVGSGEFEVLATQEEESGEVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTEGTLWSLRREDFRGILMSKFSNLSSLKLLRSVDLLSKLTILQLSQILESLSEVSFSNGQTIIDENEAAALYIIQKGQVRITFDSDLLRNPNACSLKPDNQNENDLQSTKELSIEKPEGSYFGEWTLLGENIGTFRAIAVGDVLCTVLTKEKFESDIGPLKLFSQEDQKSRDSSSDYLKESTKSLNFSSPDKIHLSDLGWKKCVYSTDCSEVGLTLLGDSAENVLTLKRFSKQKVKMLGKEAQVFKEKALIKGMNSSACIPQVVCTCADRAYAGILLNTCLACPLSSILTSPFGESSARFCAACVVTALEDLHKNGVLYRGVSPRLLTLDQTGYIQLVDFRFGKKLSDERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLNLPETFSPEAVDLITKLLDGDESTRLGSHGPDSVKSHPWFSGVDWEGIRSHSFPAPPEIISRISQYMEIHSEDCTGSQVSPSQEVDELNIPEWLEDW 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3962g00035 1078 SMART PP2C_4 83 381 IPR001932 -
Pral3962g00035 1078 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 88 385 - -
Pral3962g00035 1078 Gene3D Jelly Rolls 450 592 IPR014710 -
Pral3962g00035 1078 SUPERFAMILY PP2C-like 82 385 IPR036457 -
Pral3962g00035 1078 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Pral3962g00035 1078 SMART serkin_6 778 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3962g00035 1078 SMART cnmp_10 477 600 IPR000595 -
Pral3962g00035 1078 SMART cnmp_10 603 740 IPR000595 -
Pral3962g00035 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 477 586 IPR000595 -
Pral3962g00035 1078 Gene3D Transferase(Phosphotransferase) domain 1 852 1037 - -
Pral3962g00035 1078 SUPERFAMILY cAMP-binding domain-like 596 726 IPR018490 -
Pral3962g00035 1078 ProSiteProfiles Protein kinase domain profile. 755 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3962g00035 1078 CDD PP2Cc 109 383 IPR001932 -
Pral3962g00035 1078 Pfam Protein phosphatase 2C 122 362 IPR001932 -
Pral3962g00035 1078 Pfam Protein kinase domain 790 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3962g00035 1078 SUPERFAMILY cAMP-binding domain-like 458 587 IPR018490 -
Pral3962g00035 1078 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Pral3962g00035 1078 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Pral3962g00035 1078 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Pral3962g00035 1078 ProSiteProfiles cAMP/cGMP binding motif profile. 603 727 IPR000595 -
Pral3962g00035 1078 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
Pral3962g00035 1078 Gene3D Phosphorylase Kinase; domain 1 789 851 - -
Pral3962g00035 1078 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 451 591 - -
Pral3962g00035 1078 CDD CAP_ED 603 722 IPR000595 -
Pral3962g00035 1078 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 463 1040 - -
Pral3962g00035 1078 Pfam Cyclic nucleotide-binding domain 496 587 IPR000595 -
Pral3962g00035 1078 Pfam Cyclic nucleotide-binding domain 622 722 IPR000595 -
Pral3962g00035 1078 SUPERFAMILY Protein kinase-like (PK-like) 793 1056 IPR011009 -
Pral3962g00035 1078 Gene3D Jelly Rolls 593 742 IPR014710 -
Pral3962g00035 1078 Gene3D - 87 384 IPR036457 -
Pral3962g00035 1078 CDD CAP_ED 477 586 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3962g00035 Pral-Chr3962 274403 282336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3962g00035 1 1078 PP2C-type Phosphatase Gene Family AT2G20050 67.548 0.0 1479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Pral3962g00035 Pkinase 8.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3962g00035 - - gmx:100799821 1799.25