Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3962g00007 ATGGAACAACCCTTGCACTTGGACTTGGACGACTTCCAGCTCCAGCAGGTCGACTCCGCCTCCCCCTTCTCCACCTCCTCTTCCGCCTCCACCTTACCCTTCGTTCTCTCTTCCGAATATTCCCGCAGCACCTCCAGCTCCGGCGACATTTCCACCATCAGCCCTGGCTCCGGCGACATTCCTGGGGTTGCGATCTCCAAGGTCCTGCCCTCACCTCGGTCGCACGATCCCCCTCCCTCCCAAGAGATGAGCGCCTCCAGGGACAAGTGCGTCGGACGGAATAACAAGGGAGTCAGTTGGGGATTTACGTCGGTGATTGGCAGGAGGAAAGAGATGGAGGACGCTGTTGCTGTTATCCCAGGGTTTATGTCCCTCCCGTGCGATCGCGTCGGCGGATGTACAGCTCCTTGCTCGAAATCCTCCACCGAGATCTCGCCCGTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGATCTCAGGTGGCCAAGTTTTGTGCCGAACGGATGCATGAAGCTGTAGCGGAAGAGTGGGATCGAGACACAGCTCAGGGCACCGAATGGCAGGGAAAGTGGGAGGCCGTTTTTGCTAGTGGCTTTGAGAAGACTGACAATAAAATTTTAACAGATGCGGTAGCACCAGAAATGGTAGGATCTACTGCTGCTGTGGTGGTTCTATCTCGTTGCCAAATCATTACATCTAACTGTGGCGACTCAAGGGCAGTTCTTTGCCGCGGCACACAAACAATCCCCTTGACTGTGGATCAGAAGCCTGATAGACAAGATGAACTGTTGAGAATTGAAGGAGCAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGAGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTATTTGAGGCCATGGATTATTCCACTGCCTGAGACGACTTTTACAACGAGGAGCGAGGAGGACGAATGCCTGATACTGGCAAGTGATGGGCTTTGGGATGTAATGACGAATGCAGAGGTCGGGGAAGTTGCACGTCATATTCTTAGACGACGACGAAGGTCCTTGTCTATGGAAGAAACTCCACCTGCCCAAGTCGTGGCTGATAGCCTCACAGAGATTGCATGCGGTAGAAATAGTAGAGACAATATTTCGATCATAGTTATTGATCTGAAATCAAAGAGAAAACGCCAGCAAAAGCCTCCTTTGACTTCCTAA 1197 0.5238 MEQPLHLDLDDFQLQQVDSASPFSTSSSASTLPFVLSSEYSRSTSSSGDISTISPGSGDIPGVAISKVLPSPRSHDPPPSQEMSASRDKCVGRNNKGVSWGFTSVIGRRKEMEDAVAVIPGFMSLPCDRVGGCTAPCSKSSTEISPVHFFGVYDGHGGSQVAKFCAERMHEAVAEEWDRDTAQGTEWQGKWEAVFASGFEKTDNKILTDAVAPEMVGSTAAVVVLSRCQIITSNCGDSRAVLCRGTQTIPLTVDQKPDRQDELLRIEGAGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPLPETTFTTRSEEDECLILASDGLWDVMTNAEVGEVARHILRRRRRSLSMEETPPAQVVADSLTEIACGRNSRDNISIIVIDLKSKRKRQQKPPLTS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3962g00007 398 SMART PP2C_SIG_2 128 384 IPR001932 -
Pral3962g00007 398 ProSiteProfiles PPM-type phosphatase domain profile. 99 384 IPR001932 -
Pral3962g00007 398 Pfam Protein phosphatase 2C 102 377 IPR001932 -
Pral3962g00007 398 CDD PP2Cc 101 384 IPR001932 -
Pral3962g00007 398 ProSitePatterns PPM-type phosphatase domain signature. 149 157 IPR000222 GO:0043169
Pral3962g00007 398 FunFam Protein phosphatase 2C 51 92 392 - -
Pral3962g00007 398 SMART PP2C_4 88 382 IPR001932 -
Pral3962g00007 398 SUPERFAMILY PP2C-like 93 385 IPR036457 -
Pral3962g00007 398 Gene3D - 86 394 IPR036457 -
Pral3962g00007 398 PANTHER PROTEIN PHOSPHATASE 83 384 IPR015655 GO:0004722|GO:0006470
Pral3962g00007 398 MobiDBLite consensus disorder prediction 41 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3962g00007 Pral-Chr3962 75259 81804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3962g00007 100 394 PP2C-type Phosphatase Gene Family AT4G26080 51.118 1.74e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3962g00007 K14497 - gmx:100793293 547.354