Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3960g00022 ATGGGGAACAAAATTGCGCGTACAACGCAAGTTTCGGCTTCGGAGTACTATCTTCATGACCTGCCCTCCACCTACAATCTCGTCTTGAAGGAGGTTTTAGGTCGAGGCCGTTTCTTCAAGTCTATTCAGTGCAAGCATGATGAGGGTTTGGTTCTGGTCAAGGTCTATTTCAAGCGTGGCGACTTCATCGATCTCAGAGAGTACGAACGGCGTCTGAGTCAGATTAGGGACATTTTCCGTGGCATTGAGCACCCTCACGTTTGGCCCTTTCAGTTTTGGCAAGAAACAGACAAAGCAGCATATCTCTTGAGGCAATATTTCTTCCATAATCTGCATGATCGCCTTAGTACTCGACCTTTTCTCAGTCTTATTGAGAAGAAATGGTTGTCTTTTCAGTTGCTCCTAGCCGTGAAACAGAGCCATGAGAAGGGAGTATGTCATGGTGATATTAAGTGTGAGAATGTGCTGATTACATCCTGGAGTTGGCTTTACCTTGCGGACTTTGCATCCTTCAAGCCCACTTACATCCCATATGATGACCCCTCAGATTTTTCTTTTTTCTTTGACACTGGTGGAAGAAGGCTCTGTTATCTAGCACCCGAGAGATTTTATGAACATGGAGGGGAGATGCAGGTAGTACAGGATGCTTCATTAAAGCCATCTATGGACATATTTGCAGTTGGGTGTGTAATTGCAGAACTTTTCCTTGAGGGACAGCCACTGTTTGAACTGTCTCAACTTCTTGCGTATCGCAGAGGACAATATGATCCTAGCCAACATCTTGAGAAGATACCGGATCCTGGAGTCCGGAAAATGATTTTGCACATGATTCAACTAGAACCAGAGTCACGGTTTTCTGCTGAAAGCTACCTGAAGGAATATGCAGCAGTTGTGTTCCCAACCTACTTCTCACCATTTTTGCATGATTTTTACCGCTGCTGGAGTCCTCTTCATTCAGATATGAAGGTTTTGTTATGTCAAAGTGCTTTCCAGGAGATACTAAAACAAATGATGAACAGTAAATCATCTGATGAGGTGGCTGTTACTTCTGGTGAGCTTTTGGGAGAGGTTGTTGGCAAAGAAAATGTCAATTTTATGAAGGACTCCCTGATGAAGAGAGATGAGATGGGAAATGGGTTAATTCCTGATCACTATGAGCTTCTTGGTGATATCAGTAGCCTGCTGAGGGGTGCTAAGAATCACAACCATTTATCTGGTCCCCGGCATGTGATAGGAAATGCACCCAATTCTATCCTTTGTGAGAATTTAAAAAATTTGCAGTCTCCTGGTGAGCTCCTTCAAATTATCTCCAATGCATTCCGAGGAAATGACCATCCCTTTCTGAAGAACGTTACAATGAATGATTTGAATTCGTTGATGTCTGATTATGATAGTCAATCGGATACTTTTGGGATGCCTTTCTTACCACTACCCAAGGATAGTATGAGATGCGAAGGCATGGTTTTGATTACTTCTTTGCTCTGCTCCTGCGTTCGCAATATCAAATTGCCTCACTTGAGGAGGGCAGCTGTGCTCTTGTTGAAGGCCTCTGCATTATATACTGATGATGAAGATCGTTTGCAGCGAGTTATCCCATATGTTATTGGAATGCTCTCTGACCCATCAGCAATTGTGCGTTGTGCTGCTTTAGAGACTTTGTGTGATATTCTGCCCCTTGTCCGAGATTTTCCACCCAGTGATGCAAAGATATTTCCTGAATACATATTTCCAATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGTTATGCCAGTAATATAGCTAAGCTGGCACTTACTGCTTATGGATTCTTGATACACTCAATAAGTTTGAGTGAGGCAGGCGTACTTGATGAATTGAGTTCACCGCAGAAGTCATTGGTATCATCTAGTCAGACTAGTGGAAGGTTGTGCAGGATAAACGGTGATGTGCAACTTTTGCAGCTGAGGAAGTCAGTTGCAGATGTTGTCCAAGAACTTGTTATGGGTCCGAAGCAAACGCCAAATATTAGAAGAGCACTCCTTCAGGACATTGGGAAGTTGTGTTATTTCTTTGGTCAGAGGCATAGTAATGACTTTCTCTTACCCATCCTCCCTGCTTTCCTTAATGATCGGGATGAACAATTACGGTCTGTGTTCTATGAGAAGATCGTATACGTCTGCTTTTTTGTCGGCCAAAGAAGTGTAGAAGAATATCTTTTACCTTACATTGAGCAGGCTTTAAGTGACACAACAGAGGCTGTCATGGTCAGAGCCTTAGATTGTTTGACCAGTCTTTGCAAAAGTGTTTTCTTCAGGAAGAGGATACTGCTTGAAATGATAGAGCGTGCATTTCCTTTGCTATGTTATCCTAGCAAATGGGTGCGTAGATCAGTGGTCTCATTCATTGCTGCTAGCAGTGAGAGCTTGGGTGCAGTAGATTCTTATGTTTATCTTGCTCCTGTTATACGACCCTTCCTTCGCAGACAGCCTGTATCTCTAGCTTCTGTGAAAGCCCTTTTTTCGTGTTTAAAGCCTCCTGTCTCGAGACAGGTTTTCCATGAAGTATTGGAGAATTCCAGGAGTTCAGACATGTTAGAAAGACAAAGAAAGATATGGTATAGTTCATCATCACAATCTAGACTATGGGAAATGGATTTACTGAGAAAAGGAATAGATGAGTTGGACTCATTGAATAGCTGGCCTGACAAGCAACAAGGTCCTGGGGGTCAACAATCTGTTGGCACTGGCTTCCCACAGCCAGGGCTAACTGATTGTGATCAGGCTGACACAAAGTTGAGAAATATGGTGACCTTTATGCATAATGATTGTATCGTATCCCCAAGGACAGAACCTCCTGTCTCGAGACAGGTTTTCCATGAAGTATTGGAGAATTCCAGGAGTTCAGACATGTTAGAAAGACAAAGAAAGATATGGTATAGTTCATCATCACAATCTAGACTATGGGAAATGGATTTACTGAGAAAAGGAATAGATGAGTTGGACTCATTGAATAGCTGGCCTGACAAGCAACAAGGTCCTGGGGGTCAACAATCTGTTGGCACTGGCTTCCCACAGCCAGGGCTAACTGATTGTGATCAGGCTGACACAAAGTTGAGAAATATGGTGACCTTTATGCATAATGATTGTAGTATGATAGGACATCGTGATCCCCAATGCTTGGAGAAGTTACAGTTCTCTGGATTGATGTCACCTCAGGTTAGTTGTAGCAGTTTGCCATATGAGAAGTCATCAAATGGCATACCTTTGTATTCTTTCAGTGTGGATAGGCGTGCAATGGGAATTCCTCCTGCGGCATCTGATTCTCCGCTACAAATGAATTCTCTAGGCATCAGTTCATCCACCATGCCTTGGGTTAGTCCAGCTAGCAAGTCCTTTAATTTGGCTAGTTCAGTTCCAGCTCCAAAGTTTGTTTCAGTTTTCATTGATCATATCTCTAGGGGTCTAGGAAATGTTGTTGAGAAGTATTCTGGCGTTGCTGACATCACAAAGAAGGATATAAAGGAAGGTGCCATCCTCAACCTATTGAACTACCCTGTGGATGCTTATACCATCATGTTTAGCACTCAGAACTGTGGTATTCATCTATGGGATACTAGGTCAAGTTCCAGTTCATGGACTCAAAAAGTTACTCCTGAGGAGGGATATATTCCTTCTTTGGTAGTAGGGCCTTGTGGTAATTGGTTTGTATCAGGGTCATCCAGGGGCGTGCTTACTCTTTGGGATCTGAGATTTCTGATACCCGTGAACTCTTGGCAGTATTCCCTTGCTTGCCCTATAGAAAAGATGTGCCTCTTCCTTCCACCTCCTAATGCCTCTTTATCTTCAACCGTGAGGCCCCTTGTTTATGTGGCTGCAGGTAGCAATGAAATTTCTCTTTGGAATGCAGAGAATGGTAGCTGCCACCAGGTATTGAAAGTGACCAATTATGACAGTGATGCAGAAAAGTCTGAACTGCCTTGGGCCTTGGCTAGACCTTCTAACAAGGGAACTTCTAGACCAGATTTGAGGCGAAATGTCAATCCCAAGTATAGAGTTGATGAACTAAATGAACCTCCTCCCCGTCTTCCTGGTATTCGTACATTGCTTCCCTTGCCCGGGGGTGATTTACTGACGGGGGGTACTGACTTGAGGATACGTCGATGGGATCACTACAGTCCTGACAAAAGTTACTGTATATGTGGACCTGACTTGAAAGGAGTGGGGAATGATGATCTGTATGAAACAAAATCTAGCTTTGGCGTGCAAATTGTACAGGAGACAAAGAGGCGTCCTCTTTCAACTAAGTTGACTGCAAAGGCAGTTGTCACGGCTGCTGCCACTGATCCTGCAGGTTGCCACCGTGATTCTATCCTTTCTTTGGCTTCTGTTAAGTTAAACCAGAGACTCTTGTTATCAAGTAGTAGAGACGGGGCTATCAAGGTTTGGAAGTAG 4446 0.4354 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFIDLREYERRLSQIRDIFRGIEHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSLIEKKWLSFQLLLAVKQSHEKGVCHGDIKCENVLITSWSWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVVQDASLKPSMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDPGVRKMILHMIQLEPESRFSAESYLKEYAAVVFPTYFSPFLHDFYRCWSPLHSDMKVLLCQSAFQEILKQMMNSKSSDEVAVTSGELLGEVVGKENVNFMKDSLMKRDEMGNGLIPDHYELLGDISSLLRGAKNHNHLSGPRHVIGNAPNSILCENLKNLQSPGELLQIISNAFRGNDHPFLKNVTMNDLNSLMSDYDSQSDTFGMPFLPLPKDSMRCEGMVLITSLLCSCVRNIKLPHLRRAAVLLLKASALYTDDEDRLQRVIPYVIGMLSDPSAIVRCAALETLCDILPLVRDFPPSDAKIFPEYIFPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLDELSSPQKSLVSSSQTSGRLCRINGDVQLLQLRKSVADVVQELVMGPKQTPNIRRALLQDIGKLCYFFGQRHSNDFLLPILPAFLNDRDEQLRSVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDTTEAVMVRALDCLTSLCKSVFFRKRILLEMIERAFPLLCYPSKWVRRSVVSFIAASSESLGAVDSYVYLAPVIRPFLRRQPVSLASVKALFSCLKPPVSRQVFHEVLENSRSSDMLERQRKIWYSSSSQSRLWEMDLLRKGIDELDSLNSWPDKQQGPGGQQSVGTGFPQPGLTDCDQADTKLRNMVTFMHNDCIVSPRTEPPVSRQVFHEVLENSRSSDMLERQRKIWYSSSSQSRLWEMDLLRKGIDELDSLNSWPDKQQGPGGQQSVGTGFPQPGLTDCDQADTKLRNMVTFMHNDCSMIGHRDPQCLEKLQFSGLMSPQVSCSSLPYEKSSNGIPLYSFSVDRRAMGIPPAASDSPLQMNSLGISSSTMPWVSPASKSFNLASSVPAPKFVSVFIDHISRGLGNVVEKYSGVADITKKDIKEGAILNLLNYPVDAYTIMFSTQNCGIHLWDTRSSSSSWTQKVTPEEGYIPSLVVGPCGNWFVSGSSRGVLTLWDLRFLIPVNSWQYSLACPIEKMCLFLPPPNASLSSTVRPLVYVAAGSNEISLWNAENGSCHQVLKVTNYDSDAEKSELPWALARPSNKGTSRPDLRRNVNPKYRVDELNEPPPRLPGIRTLLPLPGGDLLTGGTDLRIRRWDHYSPDKSYCICGPDLKGVGNDDLYETKSSFGVQIVQETKRRPLSTKLTAKAVVTAAATDPAGCHRDSILSLASVKLNQRLLLSSSRDGAIKVWK 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3960g00022 1481 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3960g00022 1481 Gene3D - 1270 1481 IPR015943 GO:0005515
Pral3960g00022 1481 FunFam Protein kinase family protein / WD-40 repeat family protein 626 836 - -
Pral3960g00022 1481 FunFam Protein kinase family protein / WD-40 repeat family protein 24 348 - -
Pral3960g00022 1481 MobiDBLite consensus disorder prediction 895 919 - -
Pral3960g00022 1481 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 948 1138 IPR045162 GO:0004674|GO:0016236|GO:0045324
Pral3960g00022 1481 ProSiteProfiles Trp-Asp (WD) repeats profile. 1448 1481 IPR001680 GO:0005515
Pral3960g00022 1481 CDD STKc_Vps15 16 303 - -
Pral3960g00022 1481 Gene3D - 1142 1264 IPR015943 GO:0005515
Pral3960g00022 1481 SUPERFAMILY ARM repeat 314 824 IPR016024 -
Pral3960g00022 1481 ProSiteProfiles HEAT repeat profile. 698 736 IPR021133 -
Pral3960g00022 1481 SUPERFAMILY WD40 repeat-like 1173 1481 IPR036322 GO:0005515
Pral3960g00022 1481 SUPERFAMILY Protein kinase-like (PK-like) 26 326 IPR011009 -
Pral3960g00022 1481 MobiDBLite consensus disorder prediction 1001 1026 - -
Pral3960g00022 1481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pral3960g00022 1481 MobiDBLite consensus disorder prediction 896 916 - -
Pral3960g00022 1481 Gene3D - 617 842 IPR011989 -
Pral3960g00022 1481 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 476 615 - -
Pral3960g00022 1481 ProSiteProfiles HEAT repeat profile. 530 562 IPR021133 -
Pral3960g00022 1481 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3960g00022 1481 MobiDBLite consensus disorder prediction 1002 1022 - -
Pral3960g00022 1481 Pfam HEAT repeat 530 558 IPR000357 GO:0005515
Pral3960g00022 1481 Gene3D - 472 616 IPR011989 -
Pral3960g00022 1481 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1448 1481 - -
Pral3960g00022 1481 SMART WD40_4 1435 1481 IPR001680 GO:0005515
Pral3960g00022 1481 SMART WD40_4 1353 1387 IPR001680 GO:0005515
Pral3960g00022 1481 SMART WD40_4 1207 1246 IPR001680 GO:0005515
Pral3960g00022 1481 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3960g00022 1481 Gene3D Transferase(Phosphotransferase) domain 1 22 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3960g00022 Pral-Chr3960 159284 169678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3960g00022 31 324 AGC Kinase Gene Family AT3G08730 24.233 1.17e-10 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Pral3960g00022 Pkinase 3.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3960g00022 K08333 - twl:119997128 1858.96