Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3960g00013 ATGAAGATTGAGCAACTGGACAATGTTGATTCCACTAGGGACGAAGGGAGTAATGAGAATCAGATTGTGAGGGTTGACGCAAAGAGAGCGTTAGTTGGAGCAGGTGCTCGGATCTTGTTTTACCCGACTCTTTTGTATAATGTACTTCGGAACAAGATTGAAGCCGAGTTCAGGTGGTGGGATCAAGTCGATGAGTTTTTATTATTGGGTGCTGTTCCATTTCCTAAAGATGTTCCTCGCTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTGAATGAACCTTATGAAACGTTGGTTCCATCATCATTGTATCGTGCTCATGAGATTGATCATTTAATGATTCCTACAAGGGATTATCTCTTTGCCCCTTCACTAGAGGATATTAGCCGTGCCGTGAAATTCATTCATGAAAATGCATGTTGCGGTAAAACTACTTATGTCCATTGCAAAGCCGGTCGAGGAAGGAGCACGACGATTGTTCTTTGTTACTTGGTTGAATATAAGCACATGACACCCGCAGCTGCCCTGGATTATGTGCGTTCTCGCAGACCTAGGGTGCTGCTAGCACCATCACAGTGGAAGGTTGTTCAAAACTACAGCAAATGCCAACCTTCTCCTTGTATTGCCAGGCCTACTCCTACGCCATACTCTCCCTCTAGGGACGCAGTTCTTATAACCCAAGCTGACCTTGAGGGTTACCACAACGCATGCGATGCTGGTATGCAGTTGGCTGTCGTTGCTAAAGTGCCAAGGACCAAGCCCATGATAGCAAGATTATCTTGCCTGTTTGCGTCCCTTAAAGTTTCTGGTAGCAGTGTCCCAGCAGTCAGGCGGTTGCTAGTTTCTGAGGCACGCGCTTGCTAA 867 0.4625 MKIEQLDNVDSTRDEGSNENQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDQVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYRAHEIDHLMIPTRDYLFAPSLEDISRAVKFIHENACCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALDYVRSRRPRVLLAPSQWKVVQNYSKCQPSPCIARPTPTPYSPSRDAVLITQADLEGYHNACDAGMQLAVVAKVPRTKPMIARLSCLFASLKVSGSSVPAVRRLLVSEARAC 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3960g00013 288 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 266 - -
Pral3960g00013 288 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Pral3960g00013 288 Gene3D Protein tyrosine phosphatase superfamily 59 204 IPR029021 -
Pral3960g00013 288 FunFam Dual specificity phosphatase domain protein 59 206 - -
Pral3960g00013 288 CDD PTPMT1 59 202 IPR044596 GO:0004721
Pral3960g00013 288 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Pral3960g00013 288 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Pral3960g00013 288 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Pral3960g00013 288 Pfam Dual specificity phosphatase, catalytic domain 82 201 IPR000340 GO:0008138|GO:0016311
Pral3960g00013 288 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 201 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3960g00013 Pral-Chr3960 101430 104141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3960g00013 1 268 Protein tyrosine phosphatase (PTP) family AT2G35680 50.794 1.15e-99 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3960g00013 - - gmx:100817410 480.33