LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3960g00002	ATGACAATGCTGATCAGATTCATCTCCTCGACTATGATGCTTCATCTTGTTCTTATGGTTTCAGTTCTTGGACAGAGACAAACAGGCTTCATCAGTATTGATTGCGGAGGTCCAGAGAATTTTGAATACACAGATGATAGCGATCAAATAAAGTACAGCACAGATGGAGCCTACATACAAGCAGGGGTTAACAAAAACATATCGTCAGAATACTCATATCCAAACAATCCCAATCTACCATTACCAATGTCTGACCTCAGAAGTTTCCCCAAGGGAAAGAGGAACTGTTACACATTAAGAGCTGGACAAAGAGGAAGCTTACGTTTGATAAGGGCCTCTTTTTTGTATGGGAACTACGATGGAGAAAACAGGCTTCCAGAATTTGATCTCTATGTTGGTGCCAATTTCTGGTCCTCAGTAAGCTTCAAAAATTTTTCAGAGCCAGTTACACTGGAAATTATCAGCATGGCAGAATCAGAGGTGACGAATGTTTGTCTTGTGGACAGGGGACTGGGAACTCCTTTTATCTCAGCGTTGGAACTAAGACCACTCAATAGTTCGATTTATAATACTGAGTTTGGTGCATCAGCTTCACTGTTACTTTTCAAAAGATGGGACCTTGGAGCAATTAATGGTAGCGGTAGATATGAAGATGACATATATGACAGAATTTGGTCCCCATATGGCTCATCTTCCTGGGATTCTGTCAGCACTTCCCATGCTATAAATGGCAATAACAATGGCTATAGAATGCCATCTGAAGTGATGAGAACTTCTTCAAGACCCAAAAATGTTAGTGCTCCTTTTGAATTCTCTTGGACCCCAAATGCTCCAAATTCAAAATTCTATGTATACTTGTATTTTGCTGAGGTGAAGCAGCTTAAGATTAACCAACTAAGGAAATTCAGAATATCCTGGAATGGACATTCATTGTTTGGACCCTTAGTCCCAAGCTACTTAGATGCAACCACAATATCGAATTTGAAACCCCTGATGGGACATGAACATCGAATTTCTCTTCATAGAACTGAAGATTCAACCCTTCCGCCCATGCTTAACGCAGTTGAGATATTTGAAGTTAGAATGATGGATGCATTCCCAACACTTGAGAAGGATGTAAATGCTATCGTGGATATCAAAGATGCATATGGAATTGAAAGAAACTGGGTGGGTGATCCGTGTGAGCCAAAGAACCACACTTGGGAAGGCTTAACATGTAAATATAGCAATTCACATCCTCCACGAATCGTATCTCTGAATCTGAGCTCAAGCAGCTTGGGTGGGGTGATTTCTTCTGCCATCTGCAACCTCTTATCACTTGAATCATTGGATTTATCAAACAATAGCTTATCGGGGTCAATTCCGAAGTTTCTGGCAGAGATGAGATCTCTCAAAATTTTGAATTTGAAAGGCAACCAACTATCAGGTCTTGTCCCTACAGCTCTTCTTAAAAGATCAAGGGCAGGATTGCTTAAACTGAGTGTGGATGCCCAGAATCTTTGTGGCTCAGACAAGTGCGAGAAGAAGCTAAATGTATTTGTTCCCATAGTTGCTACGATATCATCACTTCTGGTTCTACTGATTGTTTTCATTATCATCTGGAAAGTTAGAAGAAATGTGCAACCAGATCATACAAGTAATTCCAACAAAGAAAGAACACTTGTGGCATCAAAGAAGTGGCAATATAGTTTTGCAGAGGTATTGGACATCACCAACAACTTTGAAATTGTCATTGGGAAGGGGGGATTTGGGACTGTGTACCGGGGTCAGATGAAAGATGGGAACCAAGTGGCAGTAAAAAAGCTTTCTCCATTATCATCTCAAGGGCCAAGGGAATTTCAGACTGAGGCTGAGCTCTTGATGACAGTCCATCACAAAAATTTGGTAGCCTTCATTGGTTATTGCGATGATGGAAACAAAATGGCACTCATATATGAGTACATGGGAAATGGAAACCTCAAAAACTACCTTTCAGCAAGAAATTCACGTTGCTTGACTTGGGGAAGGAGACTTCAGATAGCAATTGACGCTGCACAGGGATTGGAGTATTTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTGAAGACGGCCAATATTCTTCTAAGTGAGAAGTTGGAAGCTAAGATAGCAGATTTTGGCCTCTCCCACGTGTTTAAGAATGACACTAGAGATGTAGGATCCTCAGTGAATACAAACGATCAAGGAAATGCAGAACCTGCTGTTATGGGTACCAAAGGGTACCTTGACCCAGAATACTACAAATCAAGGAAGTTGAATGAGAAAAGTGATGTCTATAGCTTTGGAATTGTTCTGTTGGAGCTAATTACAGGTCAACCTGCTGTATTAAAGGGAGAGGAATCAGTTCACATACTTGACTGGTTAAGATCTGAGCTTCGAAGAGGAGATTTGAGTAAAATTGTAGATCCAAAGCTACATGGTAAATACAATGCATTGCAGATAGAGCTTATCTTCCAAAACAATGCATTGTTGTCTTGA	2505	0.4064	MTMLIRFISSTMMLHLVLMVSVLGQRQTGFISIDCGGPENFEYTDDSDQIKYSTDGAYIQAGVNKNISSEYSYPNNPNLPLPMSDLRSFPKGKRNCYTLRAGQRGSLRLIRASFLYGNYDGENRLPEFDLYVGANFWSSVSFKNFSEPVTLEIISMAESEVTNVCLVDRGLGTPFISALELRPLNSSIYNTEFGASASLLLFKRWDLGAINGSGRYEDDIYDRIWSPYGSSSWDSVSTSHAINGNNNGYRMPSEVMRTSSRPKNVSAPFEFSWTPNAPNSKFYVYLYFAEVKQLKINQLRKFRISWNGHSLFGPLVPSYLDATTISNLKPLMGHEHRISLHRTEDSTLPPMLNAVEIFEVRMMDAFPTLEKDVNAIVDIKDAYGIERNWVGDPCEPKNHTWEGLTCKYSNSHPPRIVSLNLSSSSLGGVISSAICNLLSLESLDLSNNSLSGSIPKFLAEMRSLKILNLKGNQLSGLVPTALLKRSRAGLLKLSVDAQNLCGSDKCEKKLNVFVPIVATISSLLVLLIVFIIIWKVRRNVQPDHTSNSNKERTLVASKKWQYSFAEVLDITNNFEIVIGKGGFGTVYRGQMKDGNQVAVKKLSPLSSQGPREFQTEAELLMTVHHKNLVAFIGYCDDGNKMALIYEYMGNGNLKNYLSARNSRCLTWGRRLQIAIDAAQGLEYLHHGCKPPIIHRDVKTANILLSEKLEAKIADFGLSHVFKNDTRDVGSSVNTNDQGNAEPAVMGTKGYLDPEYYKSRKLNEKSDVYSFGIVLLELITGQPAVLKGEESVHILDWLRSELRRGDLSKIVDPKLHGKYNALQIELIFQNNALLS	834

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3960g00002	834	ProSitePatterns	Protein kinases ATP-binding region signature.	578	601	IPR017441	GO:0005524
	Pral3960g00002	834	FunFam	Leucine-rich repeat receptor-like kinase	371	503	-	-
	Pral3960g00002	834	ProSiteProfiles	Protein kinase domain profile.	572	834	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3960g00002	834	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	692	704	IPR008271	GO:0004672\|GO:0006468
	Pral3960g00002	834	ProSiteProfiles	Leucine-rich repeat profile.	463	484	IPR001611	GO:0005515
	Pral3960g00002	834	SUPERFAMILY	L domain-like	388	484	-	-
	Pral3960g00002	834	Gene3D	Transferase(Phosphotransferase) domain 1	648	829	-	-
	Pral3960g00002	834	FunFam	Leucine-rich repeat receptor-like protein kinase	547	647	-	-
	Pral3960g00002	834	Pfam	Leucine rich repeat	415	474	IPR001611	GO:0005515
	Pral3960g00002	834	SMART	serkin_6	572	826	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3960g00002	834	Pfam	Malectin-like domain	33	360	IPR024788	-
	Pral3960g00002	834	Gene3D	Phosphorylase Kinase; domain 1	535	647	-	-
	Pral3960g00002	834	Pfam	Protein tyrosine and serine/threonine kinase	576	782	IPR001245	GO:0004672\|GO:0006468
	Pral3960g00002	834	ProSiteProfiles	Leucine-rich repeat profile.	439	461	IPR001611	GO:0005515
	Pral3960g00002	834	SUPERFAMILY	Protein kinase-like (PK-like)	553	816	IPR011009	-
	Pral3960g00002	834	Gene3D	Ribonuclease Inhibitor	373	489	IPR032675	-
	Pral3960g00002	834	PRINTS	Leucine-rich repeat signature	461	474	-	-
	Pral3960g00002	834	PRINTS	Leucine-rich repeat signature	440	453	-	-
	Pral3960g00002	834	PANTHER	OS07G0107800 PROTEIN-RELATED	31	821	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3960g00002	Pral-Chr3960	13055	34415	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3960g00002	16	820	Receptor kinase-like Gene Family	AT4G29180	52.619	0.0	837

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Pral3960g00002		Malectin_like	6.4e-104	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3960g00002	-		-	lang:109342711	1117.83