Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral3958g00010 | ATGGAGAAGGAAACCAAGCCAGCCGCTATCCACAATCCTCCAATATTGATGAGTGAGGGATTAGTTAAGTACATTCTGGAGAGCGGTGTTTACCCGCGCGAATCAGAGCCTCTAAGAGAGTTGAGGAATGCTACTGAAAACCACCCTCTGAACTTTCTGGCCTCTTCCCCGGATGCGGGTCAGCTCATGGCATTGCTCTTGAAGCTCCTGAATCCGAAAAAGACAATTGAAGTTGGAGTTTTCACTGGCTACTCCCTTCTCCTCACTGCGCTTAACATTCCTGATGATGGAAAGATTATAGCGTTGGATCCAGACAGAAATTCTTACGAAATTGGGCTTCCGTTCATCAAGAAGGCCGGCGTGGAGCACAAGATTCAGTTCTTGCAATCACCAGCTCTGCCAGTTCTGGATAAACTCTTAAAAGATCCGGCAAACGATGGAAGCTTTGACTTCGCGTTCGTGGATGCGGACAAGAACAACTACTGGAATTACCATGAGAGGCTGATGAAATTGGTGAGGATCGGAGGGATAATCGCGTACGATGACACACTTTGGGGTGGAATGGTAGCGATGGCGGAAGAGGAAGTTCCAGAGGACAAAAGGGAATGGAGGAAGCAAGCAATTGCCTTCAACAAAGCGATCGCGGCTGATTCTCGTGTGGAGCTCACGCTCGCCTCCGTCGGCGATGGCCTCACCATCTGCAGGCGCCTTCTCTGA | 717 | 0.4979 | MEKETKPAAIHNPPILMSEGLVKYILESGVYPRESEPLRELRNATENHPLNFLASSPDAGQLMALLLKLLNPKKTIEVGVFTGYSLLLTALNIPDDGKIIALDPDRNSYEIGLPFIKKAGVEHKIQFLQSPALPVLDKLLKDPANDGSFDFAFVDADKNNYWNYHERLMKLVRIGGIIAYDDTLWGGMVAMAEEEVPEDKREWRKQAIAFNKAIAADSRVELTLASVGDGLTICRRLL | 238 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral3958g00010 | 238 | PANTHER | O-METHYLTRANSFERASE-RELATED | 11 | 237 | - | - | |
| Pral3958g00010 | 238 | Gene3D | Vaccinia Virus protein VP39 | 7 | 238 | IPR029063 | - | |
| Pral3958g00010 | 238 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 18 | 236 | IPR029063 | - | |
| Pral3958g00010 | 238 | CDD | AdoMet_MTases | 76 | 185 | - | - | |
| Pral3958g00010 | 238 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 14 | 237 | IPR002935 | GO:0008171 | |
| Pral3958g00010 | 238 | Pfam | O-methyltransferase | 34 | 237 | IPR002935 | GO:0008171 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral3958g00010 | Pral-Chr3958 | 55236 | 56452 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral3958g00010 | 15 | 237 | Monolignol Biosynthesis Gene Families | AT4G26220 | 64.574 | 4.13e-107 | 306 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral3958g00010 | K00588 | - | gmx:100795229 | 340.887 |