Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3958g00005 ATGAGTCACTACACTCGCTTCGAAGACACGGACGAGATCATTGAGGATGCTGCTGTGAGCTCCAACCACGACGACTCCATTTGCGAGCTCGATGGTTCCGTTGACAAAGCCGTTGAAGGCTCAGCGGGCGAGCCTTCCATGGTCCTCGTCGGTTCAGAATCAGATGATAAAACAAGTGCCGATTATTACTTTGATTCCTACTCTCACTTTGGAATTCACGAAGAAATGTTGAAGGATACTGTGAGAACTAAGACATACCAGAATGTGATTTATCAGAATAAATTTTTATTCAAGAATAAAGTAGTTCTTGATGTGGGTGCTGGGACGGGAATTTTATCTCTCTTCTGTGCCAAAGCTGGGGCAGAACATGTCTATGCAGTTGAATGCTCTGATATGGCTGACATGGCAATGGAGATAGTTGAAACTAATGGGTACTCTAATGTTATAACAGTTTTGAAGGGAAAGATTGAAGAAATTGAACTTCCTGTCGCTAAAGTTGACATAATCATTTCAGAATGGATGGGGTACTTCTTGTTGTTTGAGAACATGCTTAATACCGTCCTCTATGCCCGCGACAAGTGGCTAGTGGATGATGGAGTTGTACTACCAGATAAAGCGTCTCTATATCTTACAGCAATTGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAATAACGTATATGGATTTGACATGAACTGCATTAAGAAGCAGGCAATTATGGAGCCTCTTGTTGACACAGTTGACAAAAATCAGATTGTTACAAATTGCCAGCTACTCAAGACAATGGATATCTCTAAAATGGTACCCGGAGATGCGTCATTCACGGCGCCTTTTAAGCTTGTAGCTGAACGTGATGATTATATTCATGCGCTTGTAGCATATTTTGACGTATCATTTACCAGGTGTCATAAATTGATGGGCTTCTCTACAGGGCCAAGATCCCGTGCGACTCATTGGAAGCAAACAGTGCTTTACCTAGAAGACGTTTTGACCATTTGTGAGGGAGAGGCCATTGTGGGAAACATGACCGTGGCACAAAATAAGAAAAATCCTCGAGATGTTGACATAATGCTCAAGTTTTCATTAAATGGTCGACGATGCGTGGTTTCAAGAGTTCAGTATTACAAGATGCGCTGA 1146 0.418 MSHYTRFEDTDEIIEDAAVSSNHDDSICELDGSVDKAVEGSAGEPSMVLVGSESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSDMADMAMEIVETNGYSNVITVLKGKIEEIELPVAKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGVVLPDKASLYLTAIEDADYKEDKIEFWNNVYGFDMNCIKKQAIMEPLVDTVDKNQIVTNCQLLKTMDISKMVPGDASFTAPFKLVAERDDYIHALVAYFDVSFTRCHKLMGFSTGPRSRATHWKQTVLYLEDVLTICEGEAIVGNMTVAQNKKNPRDVDIMLKFSLNGRRCVVSRVQYYKMR 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3958g00005 381 Pfam Ribosomal protein L11 methyltransferase (PrmA) 97 172 - -
Pral3958g00005 381 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 60 361 IPR025799 GO:0016274|GO:0018216
Pral3958g00005 381 Gene3D - 205 381 - -
Pral3958g00005 381 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 66 380 IPR029063 -
Pral3958g00005 381 CDD AdoMet_MTases 102 202 - -
Pral3958g00005 381 Gene3D Vaccinia Virus protein VP39 51 203 IPR029063 -
Pral3958g00005 381 FunFam Blast:Protein arginine N-methyltransferase 1 205 381 - -
Pral3958g00005 381 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 42 368 IPR025799 GO:0016274|GO:0018216
Pral3958g00005 381 FunFam probable protein arginine N-methyltransferase 1 51 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3958g00005 Pral-Chr3958 30528 35361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3958g00005 63 344 C2H2 Transcription Factor Family AT3G12270 39.803 5.63e-66 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3958g00005 K11434 - qsa:O6P43_007824 667.537