Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3957g00047 ATGGACTTAACCTCCACCGCTCTCAACCACATCGCCGCCTCCAATTCTACCGGTGCCAAATCCCCAGAACATGACGGTGAAATTCCGACCCGGATCCAGCCCGCACCGGTAAAGTCCTTGTCATTCTCCAACGGCGTCCTGAAGCGCCACCAGCCCCACCACAAACATCCCGTGCCGGTCACCTATAAAGAATGCTTGAAAAACCATGCAGCCAGCTTGGGAGGCCACGCGCTCGACGGTTGTGGCGAGTTCATGCCTTCTCCCAGTGCCAATTCTGCCGATCCCAGCTCCATCACATGCGCCGCCTGCGGCTGCCACCGCAATTTTCATCGCCGTGAGTCCGAGGAGCCCGTTTCCACCGCAACCCACGTCATCGAGTATCAGCCCCACCATCGGCACCACCCTCCCCCACCCCCGCCGTTCCAAGGCCCGAATCGAAGCCCCAATTCAGCTTCCCCGCCCCCGATCTCATCTTCCTACTACCCCTCCGCACCCCACATGCTCCTGGCCCTCTCTGCCGGTTTACCGGCCCATCCGGAGAGCACGGCTGCTCCGGCCAGTGCTTTGGGCACGCCGACTTTGAATTCGAGGAAGCGGTTCAGGACCAAGTTCACCCAGGAGCAGAAGGATAAAATGTACCAGTTCGCTGAGAGGGTGGGGTGGAAGATGCAGAAGAGAGACGATGAGTTGGTGCAGGAGTTCTGCCACGAGGTCGGGGTTGATAGAGGTGTTTTGAAGGTTTGGATGCACAATAATAAGAACACTCTGGGGAAGAAAGAAGCGATGAATGGGAATAGAAACGTTCTCGAGCTAGAGCAAAACAACAATCACGACAATGAAATCACGGTCAACAACAACAACGGCAGCACCCAGGATCCGAATCATCACTGCCAGAACGATAGTGGGGCAAACGCCGGTACTAACGGGTCGTCTTCATCTTCTTAA 945 0.5651 MDLTSTALNHIAASNSTGAKSPEHDGEIPTRIQPAPVKSLSFSNGVLKRHQPHHKHPVPVTYKECLKNHAASLGGHALDGCGEFMPSPSANSADPSSITCAACGCHRNFHRRESEEPVSTATHVIEYQPHHRHHPPPPPPFQGPNRSPNSASPPPISSSYYPSAPHMLLALSAGLPAHPESTAAPASALGTPTLNSRKRFRTKFTQEQKDKMYQFAERVGWKMQKRDDELVQEFCHEVGVDRGVLKVWMHNNKNTLGKKEAMNGNRNVLELEQNNNHDNEITVNNNNGSTQDPNHHCQNDSGANAGTNGSSSSS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3957g00047 314 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 51 256 - -
Pral3957g00047 314 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 61 113 IPR006456 -
Pral3957g00047 314 MobiDBLite consensus disorder prediction 278 314 - -
Pral3957g00047 314 Pfam ZF-HD protein dimerisation region 60 114 IPR006456 -
Pral3957g00047 314 SUPERFAMILY Homeodomain-like 191 258 IPR009057 -
Pral3957g00047 314 MobiDBLite consensus disorder prediction 134 151 - -
Pral3957g00047 314 FunFam Zinc-finger homeodomain protein 2 186 258 - -
Pral3957g00047 314 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 62 113 IPR006456 -
Pral3957g00047 314 NCBIfam homeobox domain, ZF-HD class 197 254 IPR006455 -
Pral3957g00047 314 MobiDBLite consensus disorder prediction 1 21 - -
Pral3957g00047 314 MobiDBLite consensus disorder prediction 1 31 - -
Pral3957g00047 314 Gene3D - 190 258 - -
Pral3957g00047 314 MobiDBLite consensus disorder prediction 128 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3957g00047 Pral-Chr3957 334949 336318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3957g00047 1 290 ZF-HD Transcription Factor Family AT5G15210 50.338 1.68e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pral3957g00047 ZF-HD_dimer 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3957g00047 - - qsa:O6P43_009085 365.54