Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3957g00043 ATGGAGGCGAGGAATGAGATGGATAAGATGAACGATGATACAATGTTACCCGGTTTTAGGTTTCACCCCACGGATGAGGAGCTTGTTGATTTTTACCTCAGAAGAAAGATTCAGCAGAAATCTCTCCCTATTGAGCTCATCAAGCAAGTGGATATTTACAAATATGATCCTTGGGATCTTCCAAAGCTGGCAAGCACTGGGGAGAAAGAGTGGTATTTCTACTGTCCAAGGGATCGGAAATACAGGAACAGTCCGCGGCCAAATAGAGTGACGAGAGCTGGGTTTTGGAAAGCCACTGGAACAGACAGGCCTATATACTCATCATCAGAAGGAAAACGCATCGGCTTGAAGAAATCTCTTGTGTTCTACAGAGGCAGAGCCGCCAAAGGCGTTAAGACCGATTGGATGATGCATGAGTTTCGCCTCCCTTCTCCCCCAGATTCACCTCCTCAGCCCAAAAAGCCCTTTGACAAAACCCTCTCTCCACAGGATTCATGGGCGATTTGTAGGATATTCAAGAAAACAAACTCCATGTCCATGGCACAGAAAGCTCTATCTCACACTTGGATGGCTCAGTTTCCAGAGAGCTTGGTATCTGATATGCTCCTCGCTCAGAGTGCAAACCGGAATCACTTGAGTTCAGAGAACTTGTCTTGCACCACAGAAATAGGATCAGCGTCAGGAAACAGGCAAGAATTATACGATCAGGTGTCTAGTGCTAATTTCTCCGGTTCAGATGTTGCCATCAACAATAGCACAGTGATCTTGAATAAGGCCCCTCAGATCCCTGTCTCGAACGGTGACGTAGCAGACACCTTCATGTTCTCCACCTTCGAATCATCAGGCCCTTGTGCCTATGTAGGTTTTGAAGGGCCAAACAATATGTTTAGCGGCGTCTCTGTGGTGAATACGCCTCATCAAGACGTAGAAGGAGTAAACATGACTACATCGACCGTAGCAGAAACTATTGGGTTTCCCTTCAGCTTGCCTCCAGTTTCAGACGATGCTTGGAAACCTACTCTCCCATGGGAATCACCACCTTGTCCTAGCGACATGTCTACTAATAGATGCTGCACTTGA 1080 0.4676 MEARNEMDKMNDDTMLPGFRFHPTDEELVDFYLRRKIQQKSLPIELIKQVDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSPRPNRVTRAGFWKATGTDRPIYSSSEGKRIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSPPDSPPQPKKPFDKTLSPQDSWAICRIFKKTNSMSMAQKALSHTWMAQFPESLVSDMLLAQSANRNHLSSENLSCTTEIGSASGNRQELYDQVSSANFSGSDVAINNSTVILNKAPQIPVSNGDVADTFMFSTFESSGPCAYVGFEGPNNMFSGVSVVNTPHQDVEGVNMTTSTVAETIGFPFSLPPVSDDAWKPTLPWESPPCPSDMSTNRCCT 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3957g00043 359 SUPERFAMILY NAC domain 10 174 IPR036093 GO:0003677|GO:0006355
Pral3957g00043 359 ProSiteProfiles NAC domain profile. 15 174 IPR003441 GO:0003677|GO:0006355
Pral3957g00043 359 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 225 - -
Pral3957g00043 359 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Pral3957g00043 359 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
Pral3957g00043 359 FunFam NAC domain-containing protein 35 24 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3957g00043 Pral-Chr3957 302495 303762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3957g00043 5 217 NAC Transcription Factor Family AT1G26870 67.290 9.97e-98 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3957g00043 NAM 5.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3957g00043 - - pcin:129296062 627.091