Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3957g00014 ATGGAGAAGACGGTGATGATTAAAAGTGGAGAGAGCAAAAGGAGCCAACTCATGGCAGAAAATCAGTTCCCAAGAACTCATTATGTCAAGAGACGGCGAAGAGAGCCTTATGCAACTGCACTTAATGATGCTCCAAGTGATCAGGTGCAACAGCAGTCGCAGCCACAGTTACAGGGTGATCAAAATTTAAGTACTAGCACTGTGAAAAGAAGTTCAAGATTTCGTGGTGTAAGCAGACATCGATGGACTGGTCGATTTGAAGCTCACCTGTGGGACAAGTTCTCTTGGAACGTAACACAGAAGAAGAAAGGGAAGCAAGTTTATCTCGGGGCTTACGATGAAGAAGAATCAGCAGCAAGAGCGTACGATTTAGCTGCACTTAAGTACTGGGGAACATCAACTTTCACTAATTTTCCGATATCAGATTATCAGCAAGAGATAGAGATAATGGAGACGATGACCAAAGAGGAGTACTTGGCTACTTTAAGAAGAAAGAGCAGTGGCTTCTCAAGAGGCGTCTCTAAGTACAGAGGCGTTGCAAGGCACCACCATAATGGTAGATGGGAAGCAAGGATAGGAAGAGTATTTGGAAACAAATACCTCTACCTTGGCACTTATAGCTCCCAAGAGGAAGCCGCGCGCGCTTATGACATAGCAGCCATTGAGTACAGAGGGATCCATGCTGTGACAAACTTTGATTTGAGTACTTACATAAGATGGTTGAAGCCTACAAGAGAAAACATCCAAGAAGCAATACCTGAATGTCAGGTGGTACCAGAGGCTCAGGCGGAGACATCCCCACCTATCTACACTCCAAAAGAGGAGAAGAAATCCATGACCCTTCAAAGTAATTCTTTCACAGCTTACCTGAACTCCCCTTGTACGCAGGATTTACTTGAAAGCAAAACCCATTTGATCTCGAGCGATAGGGCATCTTCTCCTACTGCCCTCGGCCTTCTTTTTCGATCCTCAATATTCAGAGAACTAGTCAAAAAGAACCCAAACATATCTGGACATGAAAGTGATGGAGAAGACACAAGATCAAGGGATTTACAGCAGCTGACGGGTGATGGCGAGTTAGGTGGGATCTTCTATGATGTAATTGGCAATGATGACCTGTTTGTCTGCGATACCAGCAAGTACAGCTCAGGATTGCAAGAAAGAAACTTCCAGGCCCTTCTATGA 1185 0.4464 MEKTVMIKSGESKRSQLMAENQFPRTHYVKRRRREPYATALNDAPSDQVQQQSQPQLQGDQNLSTSTVKRSSRFRGVSRHRWTGRFEAHLWDKFSWNVTQKKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYQQEIEIMETMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSSQEEAARAYDIAAIEYRGIHAVTNFDLSTYIRWLKPTRENIQEAIPECQVVPEAQAETSPPIYTPKEEKKSMTLQSNSFTAYLNSPCTQDLLESKTHLISSDRASSPTALGLLFRSSIFRELVKKNPNISGHESDGEDTRSRDLQQLTGDGELGGIFYDVIGNDDLFVCDTSKYSSGLQERNFQALL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3957g00014 394 MobiDBLite consensus disorder prediction 1 74 - -
Pral3957g00014 394 CDD AP2 72 141 IPR001471 GO:0003700|GO:0006355
Pral3957g00014 394 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Pral3957g00014 394 PRINTS Ethylene responsive element binding protein signature 215 235 IPR001471 GO:0003700|GO:0006355
Pral3957g00014 394 SMART rav1_2 73 145 IPR001471 GO:0003700|GO:0006355
Pral3957g00014 394 SMART rav1_2 175 239 IPR001471 GO:0003700|GO:0006355
Pral3957g00014 394 MobiDBLite consensus disorder prediction 43 72 - -
Pral3957g00014 394 ProSiteProfiles AP2/ERF domain profile. 73 139 IPR001471 GO:0003700|GO:0006355
Pral3957g00014 394 SUPERFAMILY DNA-binding domain 72 141 IPR016177 GO:0003677
Pral3957g00014 394 CDD AP2 174 235 IPR001471 GO:0003700|GO:0006355
Pral3957g00014 394 FunFam AP2-like ethylene-responsive transcription factor 72 141 - -
Pral3957g00014 394 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 51 300 - -
Pral3957g00014 394 ProSiteProfiles AP2/ERF domain profile. 175 233 IPR001471 GO:0003700|GO:0006355
Pral3957g00014 394 FunFam AP2-like ethylene-responsive transcription factor 174 235 - -
Pral3957g00014 394 Pfam AP2 domain 72 131 IPR001471 GO:0003700|GO:0006355
Pral3957g00014 394 Pfam AP2 domain 174 225 IPR001471 GO:0003700|GO:0006355
Pral3957g00014 394 Gene3D AP2/ERF domain 72 141 IPR036955 GO:0003700|GO:0006355
Pral3957g00014 394 Gene3D AP2/ERF domain 174 235 IPR036955 GO:0003700|GO:0006355
Pral3957g00014 394 SUPERFAMILY DNA-binding domain 174 235 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3957g00014 Pral-Chr3957 105451 108663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3957g00014 69 237 AP2-EREBP Transcription Factor Family AT5G57390 69.231 4.32e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pral3957g00014 AP2 2.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3957g00014 - - gmx:100792612 487.648