Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3957g00006 ATGGGATTCGGGAATAATGCAATTCAAGCTGGAAGTTTGGACGTGGGCAAGACACATGGAAAGAAGAAAGATGGCGCAGGGAAGCATAGTGGTTGTTGGGCTAAATTCAGTTGCATCGGAAGCTGCATACCTTCTAGATCAAAGATTGATAACTCCTTAAGTGGTGGCCCAAGCGGCAATAATGTTGAAAACAGATGTACAAATGAAAATACCAAAGATCGAACAGTTGCTCCTCCAGAGTCCTCCACTACCACTAGTAATGCAGGCAGTATACCCTCAACTCCAAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTCACATTCAATGAACTTAAATTGGCAACTAGGAATTTCAGACCAGAAAGTCTTCTTGGCGAAGGAGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGAAGAGAATGGAACTGCACCTGTCAAACCAGGTACTGGGCTTACTGTTGCAGTGAAGACCCTCAACCATGATGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAGCTGAATTATCTTGGTGATCTTGTCCACACTAATCTGGTTAAATTGATTGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATGAATTTATGCCCCGAGGAAGTTTAGAGAACCATCTCTTTAGAAGGCCCTTGCCTCTTCCGTGGTCTATCAGAATGAAAATTGCACTTGGAGCTGCAAAAGGTCTTGCCTTTCTTCATGAGGAAGCTCAGAGGCCTGTAATATATCGAGATTTCAAGACATCTAATATCCTATTAGATGCGGAATACAATGCCAAGCTTTCTGATTTCGGACTTGCCAAAGATGGTCCTGAGGTTGGAAAGACCCATGTATCGACAAGAGTTATGGGAACATATGGTTATGCAGCTCCAGAGTATGTGATGACTGGACATTTGACGTCAAAAAGTGATGTTTATAGTTTTGGAGTAGTGCTGCTTGAAATGCTTACTGGTAGACGAGCAATTGATAAACGTAGACCCAATGGGGAACACAACCTGGTGGAATGGGCAAGACCTGCACTCGGGGACCGGAGGATGTTCTACCGAATAATTGATCCGCGTCTTGAAGGTCACTTCTCAGTTAAAGGTTCACAGAAAGCTGCCCAACTGGCTGCTCAATGTCTCAGCCGTGATCCTAAATCTAGACCCATGATGAGTGAAGTTGTTCAGGTTCTCAAGCCTTTGCCAAACCTAAAGGATATGGCTATTTCATCTCAATACTTCCAGTTCACACGAGTAGATCGCACTATGTCCATGCCAAATCCCAAAAATGGTTCAAAAACACAACTAACATCTGTATCAAGGAAAGGTCAGCCTGTAAGGATCTTGTCGAGTCCAAACGGTCCACGTGGCTCTCCATATCGTCATTATTCCAAGTCGCCCAAACCTAATGGGTGA 1428 0.437 MGFGNNAIQAGSLDVGKTHGKKKDGAGKHSGCWAKFSCIGSCIPSRSKIDNSLSGGPSGNNVENRCTNENTKDRTVAPPESSTTTSNAGSIPSTPKFSEELKVSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNYLGDLVHTNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEVGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAIDKRRPNGEHNLVEWARPALGDRRMFYRIIDPRLEGHFSVKGSQKAAQLAAQCLSRDPKSRPMMSEVVQVLKPLPNLKDMAISSQYFQFTRVDRTMSMPNPKNGSKTQLTSVSRKGQPVRILSSPNGPRGSPYRHYSKSPKPNG 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3957g00006 475 Pfam Protein kinase domain 125 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3957g00006 475 MobiDBLite consensus disorder prediction 50 96 - -
Pral3957g00006 475 MobiDBLite consensus disorder prediction 426 451 - -
Pral3957g00006 475 FunFam Probable serine/threonine-protein kinase PBL8 208 422 - -
Pral3957g00006 475 Gene3D Phosphorylase Kinase; domain 1 96 207 - -
Pral3957g00006 475 SUPERFAMILY Protein kinase-like (PK-like) 96 402 IPR011009 -
Pral3957g00006 475 CDD STKc_IRAK 128 405 - -
Pral3957g00006 475 ProSitePatterns Protein kinases ATP-binding region signature. 128 160 IPR017441 GO:0005524
Pral3957g00006 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Pral3957g00006 475 FunFam Serine/threonine-protein kinase BIK1 90 207 - -
Pral3957g00006 475 Gene3D Transferase(Phosphotransferase) domain 1 208 424 - -
Pral3957g00006 475 ProSiteProfiles Protein kinase domain profile. 122 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3957g00006 475 PANTHER OS01G0588500 PROTEIN-RELATED 83 405 - -
Pral3957g00006 475 MobiDBLite consensus disorder prediction 426 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3957g00006 Pral-Chr3957 49552 54742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3957g00006 108 418 Glycoside Hydrolase AT3G07070 55.096 3.08e-113 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral3957g00006 Pkinase 6.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3957g00006 - - gmx:100305393 808.905