Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3951g00001 ATGTCGTCTCTGCTTCTGTACCTTCTGCTCAACCTTCCTCTTCTACTCTTCCTCTCCCCCATTCTTGCTTCTCCATCAGAGCTTGACATTCTCATGGCCATCAAATACTCACTCGACCCACAGAACCGATTTCTGACCTCATGGACTCCACATGCCGACCCATGTAGCGGCGCTTTCGAAGGCGTAGCATGCAACGAGCAAGGCCACGTCGCCAATATTTCGCTCCAAGGAAAGGGTCTCTCCGGCAGCCTTCCGGCAGCCGTGGGTGAACTCAAGAACTTGACGGGTCTCTATCTGCACTTCAATGCTCTGAGTGGGACGATACCCAAGGAGATTGCGAATTTGAGTAGCCTAAACGATTTGTATCTCAACGTCAATAATCTCTACGGCGACATCCCTCGTGAGATTGGAAATATGTCTAATCTCCAAGTTTTGCAGCTTTGTTATAACAAATTTACTGGGAGTATTCCCACCGAATTGGGAAATCTGGAGAGACTTAATGTTTTTGCTCTGCAATATAATCAGTTGAGTGGTGCAATTCCTGCTAGTTTGGGTCAATTGCAGTCACTAACGAGGTTGGATCTGAGCTTTAATAACCTTTTTGGTCCTATTCCAGTGAGACTAGCTGACGCGCTCAAACTAGAAAGCCTTGATATTCAAAACAATTCTCTCTCAGGCAATGTCCCTGCAGGTCTTAGAAGACTGCAAGGCGGTTTCCGGTACATCAACAACCCTGGCTTATGTGGGATTGAATTTACCAATTTAGTTGCTTGTAAATCTTTATTTGACCCTAGTAAGCCTGAACCATTTGAACCTGATAACTTTTCCACAAAGGGTCTTCCAGCATCAGTTGAACCAAAGGATGAAAAGTGCAGTGACGAAAGCCACTGTAAAAATTCATGGCAATATTCAAAAATGGCTTTGGTTTTTGGAGTGATCGGAATTATTGTTGCTTCCACAGTTTCTGGACTTTCCATGTTTGTGTGGTACCGTCGTCAGAAACAGAAAATCGGAGGCACTATTGATGCTTCTGATAGGCACATTAGCAGGAAAAATGCAGCTCCTTTGATCAGTTTAGAATATTCTAATGGATGGGATCCATTAGCCAAAGGTAGAAATACTTATTCCCAGGAAATTCTAGAGAGCTTTATGTTCAACCTAGAGGAGGTAGAACGTGCCACTCAGTGCTTCTCTGAGGTGAATTTGTTAGGGAAGAATAATTTGTCAGGAATTTACAGGGGAATTTTGAGAGATGGTTCAGTCGTGGTTGTAAAATGCATCAACAACACAAGCTGCAAGTCTGATGAAACTGAGTTCTTGAAGGGATTGAAGATATTGACCTCATTAAAACATGAAAATCTCGTTCGCTTGAGAGGGTTTTGCTGTTCTAAAGGCAGGGGAGAGTGCTTTCTTGTTTATGATTTTGCCCCAAATGGGAGTTTGTCTCAGTATTTGGATCTCAAGAAAGGTGATACTAAGATTCTGGAATGGTCTACCAGAGTATCCATCATCCATGGTATTGCTAGAGGTATTAGTTATCTGCATGGAAAGAGAGGAAGAAAACAGGCTCTAGTTCACCAGAATATATCAGCTGGAAACGTGCTTCTTGATGCACATTACAATTCATTACTCGCAGATTCAGGATTGCTCAAGCTCCTTGCTGACGATGTTGTCTTCTCCACCCTTAAAGCTTCTGCTGCCATGGGATACCTTGCTCCAGAATACACCACAACCGGTTGTGTAACCCTAAAGAGTGATATATATGCTTTCGGGGTGCTAGTTTTCCAGCTTCTTACAGGAAAAAGCGATGTTACTCAGTTATATCATTACCGGGCAGAAGCATCTGGTTATAATGATATGGTTGATGTAAACCTTGAAGGGAGATTCTCAGAATCAGAGGCAGCTAAACTGGGGAACATTGCTCTACTTTGCACACATGAATCGCCCCATGAACGACCATCTATGGACCATGTAATGCAAGAACTATCTGAGAAGTGA 1998 0.4324 MSSLLLYLLLNLPLLLFLSPILASPSELDILMAIKYSLDPQNRFLTSWTPHADPCSGAFEGVACNEQGHVANISLQGKGLSGSLPAAVGELKNLTGLYLHFNALSGTIPKEIANLSSLNDLYLNVNNLYGDIPREIGNMSNLQVLQLCYNKFTGSIPTELGNLERLNVFALQYNQLSGAIPASLGQLQSLTRLDLSFNNLFGPIPVRLADALKLESLDIQNNSLSGNVPAGLRRLQGGFRYINNPGLCGIEFTNLVACKSLFDPSKPEPFEPDNFSTKGLPASVEPKDEKCSDESHCKNSWQYSKMALVFGVIGIIVASTVSGLSMFVWYRRQKQKIGGTIDASDRHISRKNAAPLISLEYSNGWDPLAKGRNTYSQEILESFMFNLEEVERATQCFSEVNLLGKNNLSGIYRGILRDGSVVVVKCINNTSCKSDETEFLKGLKILTSLKHENLVRLRGFCCSKGRGECFLVYDFAPNGSLSQYLDLKKGDTKILEWSTRVSIIHGIARGISYLHGKRGRKQALVHQNISAGNVLLDAHYNSLLADSGLLKLLADDVVFSTLKASAAMGYLAPEYTTTGCVTLKSDIYAFGVLVFQLLTGKSDVTQLYHYRAEASGYNDMVDVNLEGRFSESEAAKLGNIALLCTHESPHERPSMDHVMQELSEK 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3951g00001 665 Gene3D Phosphorylase Kinase; domain 1 368 475 - -
Pral3951g00001 665 FunFam Protein NSP-INTERACTING KINASE 2 369 475 - -
Pral3951g00001 665 Pfam Protein tyrosine and serine/threonine kinase 402 662 IPR001245 GO:0004672|GO:0006468
Pral3951g00001 665 MobiDBLite consensus disorder prediction 272 291 - -
Pral3951g00001 665 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Pral3951g00001 665 Pfam Leucine rich repeat 140 200 IPR001611 GO:0005515
Pral3951g00001 665 SUPERFAMILY L domain-like 25 236 - -
Pral3951g00001 665 FunFam Leucine-rich repeat receptor-like kinase 26 135 - -
Pral3951g00001 665 Gene3D Ribonuclease Inhibitor 22 258 IPR032675 -
Pral3951g00001 665 ProSiteProfiles Protein kinase domain profile. 397 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3951g00001 665 CDD STKc_IRAK 403 664 - -
Pral3951g00001 665 Gene3D Transferase(Phosphotransferase) domain 1 477 665 - -
Pral3951g00001 665 FunFam Protein NSP-INTERACTING KINASE 2 137 259 - -
Pral3951g00001 665 SUPERFAMILY Protein kinase-like (PK-like) 373 662 IPR011009 -
Pral3951g00001 665 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 73 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3951g00001 Pral-Chr3951 24342 28691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3951g00001 14 510 Miscellaneous Gene Families AT4G22730 50.954 1.20e-179 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pral3951g00001 PK_Tyr_Ser-Thr 2.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3951g00001 - - jre:108981102 885.945