Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3946g00001 ATGAAAGGAAAGCGTAGACAGCTAGGGTTTCTTTCTTTCTTTCTGGTAAGATGTGTATGTAATATACAAACAGCCTGGACCTTCATCATCATCATCTCTCTCTCTCTCTCTCTCTCTGTGTATGTAATTTGTATAGAAAAATGCAGGCTGCCCAATTCCTGCTTTCTGTCTCACTCCTCCAATAGGTTGAGACACCCACAATGCCATCAATCTGAGCCACACCACTACTACCACTACCAATCTACCACCATTGTCTCCTGCTCATTCCTCACTCTGCTCGGCGTTGCTCGCAGATTCTTCTCAGCAATGCTGTCTCACAAGCTCTCTCTCTTGCTTCCCATTTTCCTCATTTTGCTTCCTTTAGCCAGACCAGATCTGGCTTCTGAGCGAGCTGCTCTGCTTGCTCTCCGTTCTTCAGTGGGTGGCCGAACCCTTCTCTGGAACGTCACCCAACAGAATCACTGCAAATGGGCTGGCGTCCAATGTGACCGTGACCAGATCGTCGAGCTTCATCTTCCCGGTGTTGGGCTTTCCGGCCAGTTACCTAACGGCATTTTTGGTAACCTCACTCATCTCCAGACTCTCAGTCTGCGTTTCAACGCTTTGACTGGAAAACTCCCTTCAGATCTCGCTTCTTGTGTCCACCTACGGAATCTTTACTTGCAGCGAAACTTGTTCTCTGGAGAAATCCCTGCATTCTTGTTCTCTTTACCCGACATGATTCGCCTTAATTTAGCGCACAACAATTTTTCCGGTGCGATTCCACTGGACTTCAACAAGTTAGCAAGGCTGAGGACTCTATATCTAGAGAATAATCAGCTTTCAGGTTCTATTCCCGGGTTGAACCTGGAAAATCTCGAGCAGTTCAATGTGTCAAACAATTTGTTAAACGGCTCGGTACCGGTGAAGTTACAGTCATTTTCTGAAGATTCATTTCTAGGGAATTCACTATGTGGGAAGCCCCTCAAGCTTTGTCCAGGAGAAGGAGCCGCAATATCTCCGTCCGGCGAGATTGAAAACAGCAATAACGGAGGGAAGAAGAAGAAATTGTCTGGTGGGGCCATCGCCGGAATAGTCGTTGGATCTGTGGTGTTGCTCCTGTTGATTGTGTTCGCTTTGATTCTCCTTTGCCGAAAGAAGAGTAATAAGAAGTCGAGCTCCGTCGACATTGCAACTATGAAGCATCCAGAAACGGAAATTCCAGGCGACAAACCCGTTCCAGATGTGGAGAACAATGGTCACAGTAATGGGTATTCGGTAGCTGCAGTGGCTGCAGCAGCCATGACAGGAAACGGCAGAACAGAATCGAACAGCAATGACGGTGTGAAGAAGTTGTCATTCTTTGGTAATTCACCGAAGGTGTTCGATCTGGAAGATTTGCTTAGAGCTTCGGCGGAGGTTCTGGGTAAAGGAACATTTGGAACAGCATATAAGGCGGTTCTGGAATCTGGTCCGGTGGTGGCTGTGAAGAGGTTGAAGGACGTGACAATTTCTGAAAAGGAATTCAAGGAGAAGATTGAATTGGTGGGAGCAATGGATCATGAGAAATTGGTCCCTCTCAGAGCTTATTATTTCAGCAGGGATGAGAAACTTCTCGTCTATGATTACATGCCAACAGGAAGCTTATCTGCACTTTTGCACGGCAACAAAGGGGCGGGTAGGACACCATTGAATTGGGAAATCAGATCAGGAATTGCACTAGGAGCTGCTCAGGGCATCGAGTACCTACATTCACGGGGACCTAATGTTTCTCATGGAAACATAAAATCATCCAACATCCTCCTCACCACATCCTGTGATGCCAGAGTGTCTGATTTTGGCCTGGCACATCTTGTTGGACCCTCCTCCACTCCCAATCGGGTCGCCGGCTACCGTGCGCCAGAAGTTACTGATCCTCGCAGAGTTTCTCAGAAGGCGGATGTCTACAGCTTTGGAGTGTTGCTGTTGGAACTTCTGACTGGAAAGGCTCCAACACATTCTCTCTTAAATGAGGAAGGAGTAGACCTCCCTAGATGGGTTCAATCTGTTGTTAGAGAAGAATGGACTTCTGAAGTGTTTGATCTTGAGCTCCTAAGGTATCAGAATGTTGAGGAGGAGATGGTTCAACTATTGCAGCTTGCAGTTGATTGTGCAGCTCAATATCCTGATAAGCGCCCTTCAATGTCTGAGGTGAGACAACGCATAGAAGAGCTACGTCGCTCAAGCTTGAAAGAGGATCAAGACCAAGTTCAGCAACCTGATCTGATCAATATAATGTAG 2259 0.4701 MKGKRRQLGFLSFFLVRCVCNIQTAWTFIIIISLSLSLSVYVICIEKCRLPNSCFLSHSSNRLRHPQCHQSEPHHYYHYQSTTIVSCSFLTLLGVARRFFSAMLSHKLSLLLPIFLILLPLARPDLASERAALLALRSSVGGRTLLWNVTQQNHCKWAGVQCDRDQIVELHLPGVGLSGQLPNGIFGNLTHLQTLSLRFNALTGKLPSDLASCVHLRNLYLQRNLFSGEIPAFLFSLPDMIRLNLAHNNFSGAIPLDFNKLARLRTLYLENNQLSGSIPGLNLENLEQFNVSNNLLNGSVPVKLQSFSEDSFLGNSLCGKPLKLCPGEGAAISPSGEIENSNNGGKKKKLSGGAIAGIVVGSVVLLLLIVFALILLCRKKSNKKSSSVDIATMKHPETEIPGDKPVPDVENNGHSNGYSVAAVAAAAMTGNGRTESNSNDGVKKLSFFGNSPKVFDLEDLLRASAEVLGKGTFGTAYKAVLESGPVVAVKRLKDVTISEKEFKEKIELVGAMDHEKLVPLRAYYFSRDEKLLVYDYMPTGSLSALLHGNKGAGRTPLNWEIRSGIALGAAQGIEYLHSRGPNVSHGNIKSSNILLTTSCDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRRVSQKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVRQRIEELRRSSLKEDQDQVQQPDLINIM 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3946g00001 752 Gene3D Ribonuclease Inhibitor 241 325 IPR032675 -
Pral3946g00001 752 MobiDBLite consensus disorder prediction 733 752 - -
Pral3946g00001 752 ProSiteProfiles Leucine-rich repeat profile. 263 285 IPR001611 GO:0005515
Pral3946g00001 752 Pfam Leucine rich repeat 180 225 IPR001611 GO:0005515
Pral3946g00001 752 PANTHER OS05G0588300 PROTEIN 112 737 - -
Pral3946g00001 752 ProSitePatterns Protein kinases ATP-binding region signature. 468 490 IPR017441 GO:0005524
Pral3946g00001 752 CDD STKc_IRAK 468 731 - -
Pral3946g00001 752 SUPERFAMILY L domain-like 147 306 - -
Pral3946g00001 752 Pfam Protein kinase domain 465 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3946g00001 752 Gene3D Phosphorylase Kinase; domain 1 427 536 - -
Pral3946g00001 752 Gene3D Transferase(Phosphotransferase) domain 1 537 750 - -
Pral3946g00001 752 Gene3D Ribonuclease Inhibitor 128 236 IPR032675 -
Pral3946g00001 752 FunFam pollen receptor-like kinase 1 431 536 - -
Pral3946g00001 752 SUPERFAMILY Protein kinase-like (PK-like) 466 732 IPR011009 -
Pral3946g00001 752 Pfam Leucine rich repeat N-terminal domain 127 163 IPR013210 -
Pral3946g00001 752 FunFam Probable inactive receptor kinase At1g48480 537 740 - -
Pral3946g00001 752 FunFam Probable inactive receptor kinase RLK902 126 282 - -
Pral3946g00001 752 ProSiteProfiles Protein kinase domain profile. 462 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3946g00001 Pral-Chr3946 3022 6286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3946g00001 125 747 Receptor kinase-like Gene Family AT1G48480 65.197 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral3946g00001 Pkinase 3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3946g00001 - - qsa:O6P43_008468 932.169